Parental gene:

RPL36A, ENSG00000241343

Aliases:RPL36A, L36A, L44L, MIG6, RPL44
Description:ribosomal protein L36a [Source:HGNC Symbol;Acc:10359]
Organism:Human (Homo sapiens)
Coordinates:X:100645811..100651105(+)


>ENSG00000241343
ATGATTGCTCCTACCGACTCCCATGAGGAAGTGCGATCGGGAACCTCCTATATACTTCCGTTTGCCTCGCGGTTTCTTTC
TTTCCGCGCCGATAGCGCTCACGCAAGCATGGTTAACGTCCCTAAAACCCGCCGGACTTTCTGTAAGAAGTGTGGCAAGC
ACCAACCCCATAAAGTGACACAGTACAAGAAGGGCAAGGATTCTCTGTACGCCCAGGGAAAGCGGCGTTATGACAGGAAG
CAGAGTGGCTATGGTGGGCAAACTAAGCCGATTTTCCGGAAAAAGGCTAAAACTACAAAGAAGATTGTGCTAAGGCTTGA
GTGCGTTGAGCCCAACTGCAGATCTAAGAGAATGCTGGCTATTAAAAGATGCAAGCATTTTGAACTGGGAGGAGATAAGA
AGAGAAAGGGCCAAGTGATCCAGTTCTAA

Library Parental gene expression (RPM)
bodymap2_adipose 3 .40 RPM
bodymap2_adrenal 19 .04 RPM
bodymap2_brain 4 .43 RPM
bodymap2_breast 2 .22 RPM
bodymap2_colon 1 .45 RPM
bodymap2_heart 0 .78 RPM
bodymap2_kidney 3 .81 RPM
bodymap2_liver 1 .77 RPM
bodymap2_lung 4 .13 RPM
bodymap2_lymph_node 3 .09 RPM
bodymap2_ovary 10 .31 RPM
bodymap2_prostate 2 .42 RPM
bodymap2_skeletal_muscle 1 .49 RPM
bodymap2_testis 1 .55 RPM
bodymap2_thyroid 4 .43 RPM
bodymap2_white_blood_cells 1 .44 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000008503 possible_ortholog 1 retrogene
retro_acar_98,
Callithrix jacchus ENSCJAG00000004864 possible_ortholog 4 retrogenes
retro_cjac_304, retro_cjac_353, retro_cjac_55, retro_cjac_72,
Equus caballus ENSECAG00000015464 possible_ortholog 9 retrogenes
retro_ecab_129, retro_ecab_131, retro_ecab_204, retro_ecab_219, retro_ecab_265, retro_ecab_268, retro_ecab_294, retro_ecab_543, retro_ecab_646,
Homo sapiens ENSG00000257529 within_species_paralog 1 retrogene
retro_hsap_1353,
Monodelphis domestica ENSMODG00000025578 possible_ortholog 2 retrogenes
retro_mdom_1878, retro_mdom_971,
Mus musculus ENSMUSG00000079435 ortholog_one2one 1 retrogene
retro_mmus_4,
Pongo abelii ENSPPYG00000025837 ortholog_one2one 37 retrogenes
retro_pabe_1141, retro_pabe_1174, retro_pabe_121, retro_pabe_1226, retro_pabe_1256, retro_pabe_1311, retro_pabe_141, retro_pabe_1463, retro_pabe_1539, retro_pabe_154, retro_pabe_1540, retro_pabe_1616, retro_pabe_1650, retro_pabe_1651, retro_pabe_1944, retro_pabe_195, retro_pabe_2011, retro_pabe_2331, retro_pabe_2443, retro_pabe_2622, retro_pabe_2857, retro_pabe_296, retro_pabe_3057, retro_pabe_3151, retro_pabe_3273, retro_pabe_3372, retro_pabe_3687, retro_pabe_3704, retro_pabe_441, retro_pabe_449, retro_pabe_55, retro_pabe_573, retro_pabe_574, retro_pabe_667, retro_pabe_73, retro_pabe_772, retro_pabe_931,
Pteropus vampyrus ENSPVAG00000001569 possible_ortholog 1 retrogene
retro_pvam_17,
Rattus norvegicus ENSRNOG00000011494 possible_ortholog 1 retrogene
retro_rnor_259,
Sarcophilus harrisii ENSSHAG00000013479 possible_ortholog 1 retrogene
retro_shar_467,
Ictidomys tridecemlineatus ENSSTOG00000027251 ortholog_one2one 20 retrogenes
retro_itri_1171, retro_itri_1189, retro_itri_1364, retro_itri_1405, retro_itri_1471, retro_itri_161, retro_itri_1681, retro_itri_290, retro_itri_385, retro_itri_430, retro_itri_555, retro_itri_609, retro_itri_644, retro_itri_730, retro_itri_753, retro_itri_784, retro_itri_803, retro_itri_845, retro_itri_865, retro_itri_903,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_2 99.06 74.65
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2. retro_hsap_647 70.94 80.99
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3. retro_hsap_1477 94.83 81.69
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4. retro_hsap_1508 70.94 82.39
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5. retro_hsap_1595 84.75 83.10
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6. retro_hsap_1782 87.21 65.65
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7. retro_hsap_2015 85.56 68.70
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8. retro_hsap_2274 78.26 80.99
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9. retro_hsap_2632 75.65 80.99
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10. retro_hsap_3461 75.68 78.17
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11. retro_hsap_3819 89.66 81.69
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12. retro_hsap_3981 77.78 76.06
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13. retro_hsap_4154 75.44 79.58
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14. retro_hsap_4299 74.36 82.39
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Download FASTA sequences of all ENSG00000241343 retrocopies