Parental gene:

HSPE1, ENSMICG00000000148

Aliases:None
Description:heat shock 10kDa protein 1 (chaperonin 10) [Source:HGNC Symbol;Acc:5269]
Organism:Mouse Lemur (Microcebus murinus)
Coordinates:scaffold_30792:7517..9034(+)


>ENSMICG00000000148
GCAGGACAAGCATTTAGAAAGTTTCTTCCGCTTTTTGACCGGGTATTGGTTGAAAGGAGTGCAGCCGAAACTGTAACCAA
AGGAGGCATTATGCTTCCAGAAAAATCTCAAGGAAAAGTGTTGCAAGCAACAGTAGTGGCTGTTGGATCGGGCTCTAAAG
GAAAGGGTGGAGAGATTCAACCAGTTAGTGTGAAAGTTGGAGACAAAGTCCTTCTCCCAGAATATGGAGGCACCAAAGTA
GTTCTAGATGACAAGGATTATTTCTTATTTAGAGATGGTGACATTCTTGGAAAGTATGTGGACTGA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000013769 possible_ortholog 18 retrogenes
retro_amel_1027, retro_amel_1083, retro_amel_1084, retro_amel_1100, retro_amel_133, retro_amel_1504, retro_amel_1513, retro_amel_1623, retro_amel_1699, retro_amel_1819, retro_amel_199, retro_amel_23, retro_amel_269, retro_amel_310, retro_amel_329, retro_amel_491, retro_amel_506, retro_amel_922,
Dasypus novemcinctus ENSDNOG00000013246 ortholog_one2one 27 retrogenes
retro_dnov_1088, retro_dnov_1117, retro_dnov_1214, retro_dnov_1375, retro_dnov_1391, retro_dnov_1405, retro_dnov_1412, retro_dnov_1428, retro_dnov_1445, retro_dnov_1546, retro_dnov_1647, retro_dnov_1652, retro_dnov_1686, retro_dnov_1821, retro_dnov_2176, retro_dnov_2291, retro_dnov_2413, retro_dnov_2569, retro_dnov_2625, retro_dnov_2652, retro_dnov_418, retro_dnov_481, retro_dnov_483, retro_dnov_490, retro_dnov_524, retro_dnov_554, retro_dnov_966,
Loxodonta africana ENSLAFG00000000057 ortholog_one2one 1 retrogene
retro_lafr_69,
Otolemur garnettii ENSOGAG00000034434 possible_ortholog 24 retrogenes
retro_ogar_1018, retro_ogar_1441, retro_ogar_1512, retro_ogar_1690, retro_ogar_1744, retro_ogar_1899, retro_ogar_191, retro_ogar_1921, retro_ogar_200, retro_ogar_2030, retro_ogar_2129, retro_ogar_2310, retro_ogar_235, retro_ogar_2439, retro_ogar_2636, retro_ogar_2928, retro_ogar_3088, retro_ogar_3350, retro_ogar_3419, retro_ogar_389, retro_ogar_777, retro_ogar_824, retro_ogar_829, retro_ogar_834,
Rattus norvegicus ENSRNOG00000014868 ortholog_one2many 6 retrogenes
retro_rnor_1094, retro_rnor_1320, retro_rnor_1334, retro_rnor_2245, retro_rnor_2296, retro_rnor_984,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmur_274 67.14 68.32
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2. retro_mmur_326 100.00 100.00
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3. retro_mmur_456 90.38 100.00
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4. retro_mmur_504 99.01 100.00
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5. retro_mmur_667 83.17 100.00
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6. retro_mmur_761 94.00 99.01
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7. retro_mmur_833 85.88 82.18
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8. retro_mmur_913 94.06 100.00
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9. retro_mmur_924 98.02 100.00
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10. retro_mmur_1036 97.03 100.00
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11. retro_mmur_1165 77.89 93.07
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12. retro_mmur_1181 93.33 59.41
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Download FASTA sequences of all ENSMICG00000000148 retrocopies