Parental gene:

RPL34, ENSMICG00000002180

Aliases:None
Description:ribosomal protein L34 [Source:HGNC Symbol;Acc:10340]
Organism:Mouse Lemur (Microcebus murinus)
Coordinates:GeneScaffold_1092:104057..105485(+)


>ENSMICG00000002180
ATGGTCCAACGTTTGACATATCGCCGTAGGCTTTCCTACAACACAGCCTCTAACAAAACTAGGCTGTCCCGAACCCCTGG
TAATAGAATTGTTTACCTTTATACCAAGAAGGTTGGGAAAGCACCAAAATCTGCATGTGGTGTGTGCCCAGGTAGACTTC
GAGGGGTTCGTGCTGTGAGACCTAAAGTTCTTATGAGGTTGTCTAAAACAAAAAAACATGTCAGTAGGGCCTATGGTGGT
TCCATGTGTGCTAAATGTGTTCGTGACAGGATCAAGCGTGCTTTCCTTATCGAGGAGCAGAAAATCGTTGTGAAGGTGTT
GAAGGCACAAGCACAGAGCCAGAAAGCTAAATAA

Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000011179 ortholog_one2one 26 retrogenes
retro_dnov_1172, retro_dnov_1775, retro_dnov_2020, retro_dnov_2025, retro_dnov_2079, retro_dnov_2127, retro_dnov_2137, retro_dnov_2275, retro_dnov_2385, retro_dnov_2501, retro_dnov_252, retro_dnov_262, retro_dnov_2627, retro_dnov_2651, retro_dnov_325, retro_dnov_339, retro_dnov_430, retro_dnov_553, retro_dnov_565, retro_dnov_59, retro_dnov_606, retro_dnov_635, retro_dnov_658, retro_dnov_862, retro_dnov_88, retro_dnov_978,
Gadus morhua ENSGMOG00000009982 ortholog_one2one 1 retrogene
retro_gmor_31,
Loxodonta africana ENSLAFG00000032615 ortholog_one2one 6 retrogenes
retro_lafr_1039, retro_lafr_1232, retro_lafr_182, retro_lafr_298, retro_lafr_306, retro_lafr_733,
Macropus eugenii ENSMEUG00000009361 ortholog_one2one 3 retrogenes
retro_meug_1012, retro_meug_1754, retro_meug_1775,
Macaca mulatta ENSMMUG00000011901 possible_ortholog 1 retrogene
retro_mmul_162,
Monodelphis domestica ENSMODG00000020601 ortholog_one2one 3 retrogenes
retro_mdom_1690, retro_mdom_774, retro_mdom_836,
Mustela putorius furo ENSMPUG00000008873 possible_ortholog 17 retrogenes
retro_mputfur_1028, retro_mputfur_1095, retro_mputfur_1130, retro_mputfur_1170, retro_mputfur_12, retro_mputfur_1242, retro_mputfur_1305, retro_mputfur_1480, retro_mputfur_1501, retro_mputfur_360, retro_mputfur_378, retro_mputfur_475, retro_mputfur_517, retro_mputfur_557, retro_mputfur_562, retro_mputfur_852, retro_mputfur_923,
Otolemur garnettii ENSOGAG00000006774 ortholog_one2one 1 retrogene
retro_ogar_44,
Pongo abelii ENSPPYG00000014988 possible_ortholog 18 retrogenes
retro_pabe_1171, retro_pabe_1351, retro_pabe_1609, retro_pabe_1630, retro_pabe_1859, retro_pabe_2338, retro_pabe_2560, retro_pabe_2784, retro_pabe_2931, retro_pabe_3330, retro_pabe_3352, retro_pabe_3375, retro_pabe_3788, retro_pabe_385, retro_pabe_420, retro_pabe_566, retro_pabe_77, retro_pabe_827,
Pelodiscus sinensis ENSPSIG00000003295 ortholog_one2one 1 retrogene
retro_psin_60,
Pan troglodytes ENSPTRG00000016353 ortholog_one2one 31 retrogenes
retro_ptro_1105, retro_ptro_1210, retro_ptro_1224, retro_ptro_1285, retro_ptro_133, retro_ptro_1358, retro_ptro_1500, retro_ptro_1570, retro_ptro_1819, retro_ptro_201, retro_ptro_2087, retro_ptro_218, retro_ptro_2302, retro_ptro_2347, retro_ptro_237, retro_ptro_2502, retro_ptro_2748, retro_ptro_2775, retro_ptro_2922, retro_ptro_3244, retro_ptro_388, retro_ptro_468, retro_ptro_513, retro_ptro_538, retro_ptro_580, retro_ptro_592, retro_ptro_643, retro_ptro_651, retro_ptro_674, retro_ptro_856, retro_ptro_865,
Sarcophilus harrisii ENSSHAG00000001357 ortholog_one2many 1 retrogene
retro_shar_799,
Sarcophilus harrisii ENSSHAG00000002052 ortholog_one2many 3 retrogenes
retro_shar_131, retro_shar_324, retro_shar_419,
Ictidomys tridecemlineatus ENSSTOG00000025964 ortholog_one2one 14 retrogenes
retro_itri_1144, retro_itri_1207, retro_itri_1234, retro_itri_1249, retro_itri_1406, retro_itri_1508, retro_itri_1521, retro_itri_1542, retro_itri_209, retro_itri_267, retro_itri_344, retro_itri_766, retro_itri_898, retro_itri_967,
Tupaia belangeri ENSTBEG00000003574 ortholog_one2one 24 retrogenes
retro_tbel_1109, retro_tbel_1298, retro_tbel_1337, retro_tbel_1532, retro_tbel_1781, retro_tbel_1857, retro_tbel_1941, retro_tbel_213, retro_tbel_2162, retro_tbel_2165, retro_tbel_2372, retro_tbel_2391, retro_tbel_2601, retro_tbel_279, retro_tbel_335, retro_tbel_3606, retro_tbel_3984, retro_tbel_4059, retro_tbel_4398, retro_tbel_657, retro_tbel_74, retro_tbel_901, retro_tbel_974, retro_tbel_983,
Xenopus tropicalis ENSXETG00000021095 ortholog_one2many 1 retrogene
retro_xtro_5,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmur_57 68.60 73.50
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2. retro_mmur_67 99.15 100.00
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3. retro_mmur_76 65.15 56.41
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4. retro_mmur_134 80.00 98.29
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5. retro_mmur_147 91.43 58.97
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6. retro_mmur_187 94.87 100.00
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7. retro_mmur_221 97.44 100.00
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8. retro_mmur_286 70.33 76.92
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9. retro_mmur_309 90.76 100.00
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10. retro_mmur_336 90.60 100.00
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11. retro_mmur_417 68.06 61.54
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12. retro_mmur_494 66.02 84.62
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13. retro_mmur_643 90.35 97.44
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14. retro_mmur_677 74.77 94.02
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15. retro_mmur_686 77.89 80.34
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16. retro_mmur_737 80.67 98.29
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17. retro_mmur_745 84.35 98.29
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18. retro_mmur_763 78.22 84.62
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19. retro_mmur_789 94.87 100.00
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20. retro_mmur_823 73.11 100.00
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21. retro_mmur_864 58.57 58.12
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22. retro_mmur_879 70.83 100.00
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23. retro_mmur_980 86.21 73.50
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24. retro_mmur_1029 89.71 58.12
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25. retro_mmur_1274 88.98 100.00
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26. retro_mmur_1302 70.59 100.00
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27. retro_mmur_1328 99.15 100.00
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28. retro_mmur_1366 66.15 53.85
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29. retro_mmur_1412 98.29 100.00
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30. retro_mmur_1424 70.83 100.00
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31. retro_mmur_1495 84.87 100.00
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32. retro_mmur_1541 91.45 100.00
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Download FASTA sequences of all ENSMICG00000002180 retrocopies