Parental gene:

Gm2178, ENSMPUG00000008873

Aliases:None
Description:predicted gene 2178 [Source:MGI Symbol;Acc:MGI:3780348]
Organism:Ferret (Mustela putorius furo)
Coordinates:GL896920.1:8223903..8230594(-)


>ENSMPUG00000008873
ATGAAGGCATTCAGAATGGTCCAGCGTTTGACCTACCGTCGTAGGCTGTCCTACAATACAGCCTCTAATAAAACTAGGCT
GTCCCGAACCCCAGGTAATAGAATCGTTTACCTTTATACCAAGAAGGTTGGGAAAGCACCGAAATCTGCATGTGGCGTGT
GCCCAGGCCGACTTCGAGGAGTTCGTGCTGTGAGGCCTAAAGTGCTTATGAGGTTGTCTAAAACGAAAAAACATGTCAGC
AGGGCGTACGGTGGTTCCATGTGTGCCAAGTGTGTTCGTGACAGGATCAAGCGTGCTTTCCTTATCGAGGAGCAGAAAAT
CGTTGTGAAAGTATTGAAGGCACAAGCACAGAGTCAGAAAGCTAAATAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000001758 ortholog_one2one 20 retrogenes
Bos taurus ENSBTAG00000014226 ortholog_one2one 13 retrogenes
Choloepus hoffmanni ENSCHOG00000009074 possible_ortholog 10 retrogenes
Cavia porcellus ENSCPOG00000000802 ortholog_one2one 6 retrogenes
Dasypus novemcinctus ENSDNOG00000011179 ortholog_one2many 26 retrogenes
Erinaceus europaeus ENSEEUG00000010390 possible_ortholog 5 retrogenes
Echinops telfairi ENSETEG00000003715 possible_ortholog 53 retrogenes
Gadus morhua ENSGMOG00000009982 ortholog_one2many 1 retrogene
Loxodonta africana ENSLAFG00000032615 ortholog_one2many 6 retrogenes
Macropus eugenii ENSMEUG00000009361 ortholog_one2many 3 retrogenes
Microcebus murinus ENSMICG00000002180 possible_ortholog 32 retrogenes
Macaca mulatta ENSMMUG00000011901 ortholog_one2one 1 retrogene
Monodelphis domestica ENSMODG00000020601 ortholog_one2many 3 retrogenes
Ornithorhynchus anatinus ENSOANG00000007856 possible_ortholog 1 retrogene
Otolemur garnettii ENSOGAG00000006774 possible_ortholog 1 retrogene
Ochotona princeps ENSOPRG00000001780 possible_ortholog 11 retrogenes
Pongo abelii ENSPPYG00000014988 possible_ortholog 18 retrogenes
Pelodiscus sinensis ENSPSIG00000003295 ortholog_one2many 1 retrogene
Pan troglodytes ENSPTRG00000016353 possible_ortholog 31 retrogenes
Sorex araneus ENSSARG00000000177 possible_ortholog 8 retrogenes
Sarcophilus harrisii ENSSHAG00000001357 ortholog_many2many 1 retrogene
Sarcophilus harrisii ENSSHAG00000002052 ortholog_many2many 3 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000025964 possible_ortholog 14 retrogenes
Tupaia belangeri ENSTBEG00000003574 ortholog_one2many 24 retrogenes
Xenopus tropicalis ENSXETG00000021095 ortholog_many2many 1 retrogene

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mputfur_12 92.31 95.90
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2. retro_mputfur_360 64.29 57.38
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3. retro_mputfur_378 61.11 86.89
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4. retro_mputfur_475 72.73 61.48
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5. retro_mputfur_517 72.64 85.25
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6. retro_mputfur_557 59.20 100.00
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7. retro_mputfur_562 79.83 97.54
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8. retro_mputfur_852 67.21 98.36
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9. retro_mputfur_923 61.79 100.00
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10. retro_mputfur_1028 71.08 66.39
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11. retro_mputfur_1095 71.31 98.36
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12. retro_mputfur_1130 68.57 85.25
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13. retro_mputfur_1170 66.10 94.26
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14. retro_mputfur_1242 88.98 96.72
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15. retro_mputfur_1305 65.33 61.48
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16. retro_mputfur_1480 64.00 61.48
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17. retro_mputfur_1501 59.83 93.44
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Download FASTA sequences of all ENSMPUG00000008873 retrocopies