Parental gene:

RPS6, ENSMLUG00000007588

Aliases:None
Description:40S ribosomal protein S6 [Source:UniProtKB/TrEMBL;Acc:G1P9K5]
Organism:Microbat (Myotis lucifugus)
Coordinates:GL429911:73256..77249(+)


>ENSMLUG00000007588
ATGAAGCTCAACATCTCTTTCCCAGCCACTGGCTGCCAGAAACTCATTGAAGTGGACGATGAACGCAAACTCCGTACCTT
CTATGAGAAGCGTATGGCCACAGAGGTTGCTGCGGACGCGCTGGGTGAAGAATGGAAGGGTTATGTGGTTCGCATCAGTG
GCGGGAACGACAAACAAGGCTTCCCCATGAAGCAGGGTGTCCTGACCCACGGCCGAGTCCGCCTGCTGCTGAGCAAGGGC
CACTCCTGTTACAGACCGAGGAGGACTGGGGAGAGAAAGCGCAAATCCGTTCGGGGTTGCATTGTGGATGCCAACCTCAG
TGTTCTCAACTTGGTCATTGTCAAGAAAGGGGAGAAAGATATTCCTGGTCTCACTGATACCACTGTGCCTCGTCGCCTGG
GGCCCAAAAGAGCCAGCAGAATCCGCAAACTTTTTAATCTTTCTAAAGAAGATGATGTCCGCAAATATGTTGTGAGAAAG
CCTCTAAACAAAGAAGGTAAGAAACCTAGGACTAAAGCACCCAAGATTCAGCGTCTTGTTACTCCACGTGTCCTGCAACA
CAAACGCAGGCGTATTGCTCTGAAGAAACAACGTACTAAGAAAAACAAGGAAGAGGCCGCAGAATATGCTAAGCTTTTGG
CTAAGAGAATGAAGGAGGCCAAAGAAAAACGCCAGGAACAGATTGCGAAGAGACGTAGACTGTCCTCTCTGAGAGCTTCT
ACCTCTAAGTCTGAGTCCAGTCAAAAATGA

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000017634 possible_ortholog 1 retrogene
retro_acar_20,
Choloepus hoffmanni ENSCHOG00000004622 ortholog_one2one 15 retrogenes
retro_chof_1018, retro_chof_1101, retro_chof_1107, retro_chof_1590, retro_chof_193, retro_chof_2036, retro_chof_2037, retro_chof_2051, retro_chof_2188, retro_chof_2363, retro_chof_2455, retro_chof_2486, retro_chof_2608, retro_chof_849, retro_chof_941,
Cavia porcellus ENSCPOG00000003750 possible_ortholog 4 retrogenes
retro_cpor_1244, retro_cpor_22, retro_cpor_317, retro_cpor_486,
Dipodomys ordii ENSDORG00000012057 ortholog_one2one 2 retrogenes
retro_dord_37, retro_dord_452,
Echinops telfairi ENSETEG00000001584 possible_ortholog 18 retrogenes
retro_etel_1143, retro_etel_1281, retro_etel_1410, retro_etel_1430, retro_etel_1575, retro_etel_167, retro_etel_1822, retro_etel_188, retro_etel_1964, retro_etel_2004, retro_etel_2041, retro_etel_2194, retro_etel_263, retro_etel_337, retro_etel_378, retro_etel_541, retro_etel_809, retro_etel_825,
Ficedula albicollis ENSFALG00000003078 possible_ortholog 1 retrogene
retro_falb_24,
Homo sapiens ENSG00000137154 possible_ortholog 16 retrogenes
retro_hsap_1009, retro_hsap_1067, retro_hsap_1231, retro_hsap_1310, retro_hsap_1967, retro_hsap_2184, retro_hsap_2298, retro_hsap_3045, retro_hsap_3996, retro_hsap_4122, retro_hsap_4235, retro_hsap_4279, retro_hsap_4860, retro_hsap_731, retro_hsap_818, retro_hsap_966,
Loxodonta africana ENSLAFG00000010766 possible_ortholog 4 retrogenes
retro_lafr_1021, retro_lafr_1239, retro_lafr_59, retro_lafr_667,
Monodelphis domestica ENSMODG00000004095 possible_ortholog 1 retrogene
retro_mdom_301,
Nomascus leucogenys ENSNLEG00000017532 ortholog_one2one 14 retrogenes
retro_nleu_1033, retro_nleu_1333, retro_nleu_1613, retro_nleu_226, retro_nleu_2471, retro_nleu_252, retro_nleu_2536, retro_nleu_2611, retro_nleu_2652, retro_nleu_2655, retro_nleu_2860, retro_nleu_313, retro_nleu_476, retro_nleu_546,
Otolemur garnettii ENSOGAG00000016254 ortholog_one2one 21 retrogenes
retro_ogar_1208, retro_ogar_1222, retro_ogar_1335, retro_ogar_1356, retro_ogar_1359, retro_ogar_1439, retro_ogar_1526, retro_ogar_1531, retro_ogar_1612, retro_ogar_1979, retro_ogar_2174, retro_ogar_2195, retro_ogar_2248, retro_ogar_2264, retro_ogar_2514, retro_ogar_2707, retro_ogar_2853, retro_ogar_3329, retro_ogar_462, retro_ogar_575, retro_ogar_782,
Ochotona princeps ENSOPRG00000012290 possible_ortholog 5 retrogenes
retro_opri_123, retro_opri_642, retro_opri_78, retro_opri_862, retro_opri_895,
Pan troglodytes ENSPTRG00000039153 possible_ortholog 19 retrogenes
retro_ptro_1313, retro_ptro_1442, retro_ptro_1627, retro_ptro_1662, retro_ptro_1994, retro_ptro_2442, retro_ptro_2713, retro_ptro_2799, retro_ptro_2878, retro_ptro_2902, retro_ptro_2938, retro_ptro_3235, retro_ptro_519, retro_ptro_569, retro_ptro_669, retro_ptro_749, retro_ptro_785, retro_ptro_799, retro_ptro_845,
Rattus norvegicus ENSRNOG00000007663 possible_ortholog 21 retrogenes
retro_rnor_1092, retro_rnor_1093, retro_rnor_1269, retro_rnor_1484, retro_rnor_1556, retro_rnor_1564, retro_rnor_1845, retro_rnor_1901, retro_rnor_1991, retro_rnor_2071, retro_rnor_2073, retro_rnor_2187, retro_rnor_2332, retro_rnor_2447, retro_rnor_2781, retro_rnor_2790, retro_rnor_558, retro_rnor_756, retro_rnor_896, retro_rnor_942, retro_rnor_943,
Sorex araneus ENSSARG00000006549 possible_ortholog 6 retrogenes
retro_sara_284, retro_sara_369, retro_sara_392, retro_sara_436, retro_sara_512, retro_sara_710,
Sarcophilus harrisii ENSSHAG00000005486 possible_ortholog 1 retrogene
retro_shar_549,
Tarsius syrichta ENSTSYG00000008569 possible_ortholog 8 retrogenes
retro_tsyr_1048, retro_tsyr_116, retro_tsyr_1521, retro_tsyr_2090, retro_tsyr_347, retro_tsyr_535, retro_tsyr_757, retro_tsyr_87,
Tursiops truncatus ENSTTRG00000001787 ortholog_one2one 11 retrogenes
retro_ttru_1024, retro_ttru_107, retro_ttru_1275, retro_ttru_370, retro_ttru_468, retro_ttru_587, retro_ttru_748, retro_ttru_786, retro_ttru_878, retro_ttru_905, retro_ttru_934,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mluc_490 71.53 54.22
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2. retro_mluc_493 77.21 53.41
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3. retro_mluc_514 86.42 64.66
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4. retro_mluc_557 78.33 95.18
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5. retro_mluc_652 92.80 100.00
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6. retro_mluc_678 73.68 60.64
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7. retro_mluc_722 85.71 77.51
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8. retro_mluc_830 71.52 57.83
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9. retro_mluc_1041 72.31 77.91
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10. retro_mluc_1146 66.09 68.27
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11. retro_mluc_1169 80.48 99.60
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12. retro_mluc_1393 96.00 100.00
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13. retro_mluc_1411 65.36 60.24
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14. retro_mluc_1448 77.21 53.41
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15. retro_mluc_1472 71.22 55.42
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16. retro_mluc_1532 68.32 63.86
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17. retro_mluc_1566 74.19 73.90
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18. retro_mluc_1593 55.30 51.81
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19. retro_mluc_1629 75.00 53.82
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20. retro_mluc_1635 69.93 56.22
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21. retro_mluc_1723 70.68 53.01
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22. retro_mluc_1799 73.41 67.47
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23. retro_mluc_1909 82.00 99.20
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24. retro_mluc_1928 79.76 100.00
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25. retro_mluc_1933 73.38 54.62
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26. retro_mluc_2110 79.60 79.92
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27. retro_mluc_2129 76.57 70.28
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Download FASTA sequences of all ENSMLUG00000007588 retrocopies