Parental gene:

Rac1, ENSMUSG00000001847

Aliases:Rac1, AL023026, D5Ertd559e
Description:RAS-related C3 botulinum substrate 1 [Source:MGI Symbol;Acc:MGI:97845]
Organism:Mouse (Mus musculus)
Coordinates:5:143505477..143528036(-)


>ENSMUSG00000001847
ATGCAGGCCATCAAGTGTGTGGTGGTGGGAGACGGAGCTGTTGGTAAAACCTGCCTGCTCATCAGTTACACGACCAATGC
ATTTCCTGGAGAGTACATCCCCACCGTCTTTGACAACTATTCTGCCAATGTTATGGTAGATGGAAAACCAGTGAATCTGG
GCCTATGGGACACAGCTGGACAAGAAGATTATGACAGATTGCGTCCCCTCTCCTACCCGCAGACAGACGTGTTCTTAATT
TGCTTTTCCCTTGTGAGTCCTGCATCATTTGAAAATGTCCGTGCAAAGTGGTATCCTGAAGTGCGACACCACTGTCCCAA
TACTCCTATCATCCTCGTGGGGACGAAGCTTGATCTTAGGGATGATAAGGACACCATTGAGAAGCTGAAGGAGAAGAAGC
TGACTCCCATCACCTACCCGCAGGGGCTGGCCATGGCGAAAGAGATCGGTGCTGTCAAATACCTGGAGTGCTCAGCTCTC
ACACAGCGAGGACTCAAGACAGTGTTTGACGAAGCTATCCGAGCGGTTCTCTGTCCCCCTCCTGTCAAGAAGAGGAAGAG
AAAATGCCTGCTGTTGTAA

Library Parental gene expression (RPM)
SRP007412_brain 233 .30 RPM
SRP007412_cerebellum 180 .20 RPM
SRP007412_heart 117 .67 RPM
SRP007412_kidney 141 .31 RPM
SRP007412_liver 97 .08 RPM
SRP007412_testis 23 .88 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000136238 ortholog_one2one 6 retrogenes
retro_hsap_1256, retro_hsap_1925, retro_hsap_28, retro_hsap_3036, retro_hsap_3072, retro_hsap_4910,
Gorilla gorilla ENSGGOG00000026733 ortholog_one2one 2 retrogenes
retro_ggor_2110, retro_ggor_217,
Mus musculus ENSMUSG00000006699 other_paralog 3 retrogenes
retro_mmus_2816, retro_mmus_2995, retro_mmus_3170,
Pan troglodytes ENSPTRG00000018910 ortholog_one2many 4 retrogenes
retro_ptro_1288, retro_ptro_3044, retro_ptro_3274, retro_ptro_36,
Rattus norvegicus ENSRNOG00000001068 ortholog_one2one 1 retrogene
retro_rnor_230,
Ictidomys tridecemlineatus ENSSTOG00000006784 ortholog_one2one 1 retrogene
retro_itri_1503,
Tupaia belangeri ENSTBEG00000007272 possible_ortholog 4 retrogenes
retro_tbel_1796, retro_tbel_2564, retro_tbel_4296, retro_tbel_9,
Tarsius syrichta ENSTSYG00000001618 ortholog_one2one 2 retrogenes
retro_tsyr_2027, retro_tsyr_2068,
Xenopus tropicalis ENSXETG00000027593 ortholog_one2one 1 retrogene
retro_xtro_1,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_234 71.88 100.00
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2. retro_mmus_1372 91.16 93.75
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Download FASTA sequences of all ENSMUSG00000001847 retrocopies