Parental gene:

Tuba1c, ENSMUSG00000043091

Aliases:Tuba1c, M[a]6, Tuba6
Description:tubulin, alpha 1C [Source:MGI Symbol;Acc:MGI:1095409]
Organism:Mouse (Mus musculus)
Coordinates:15:99029890..99038105(+)


>ENSMUSG00000043091
ATGCGTGAGTGCATCTCCATCCACGTTGGCCAGGCTGGTGTCCAGATCGGCAATGCCTGCTGGGAGCTCTACTGCCTGGA
ACATGGCATCCAGCCTGATGGCCAGATGCCAAGTGACAAGACCATTGGGGGAGGAGATGACTCCTTCAACACCTTCTTCA
GTGAGACAGGAGCTGGCAAGCATGTGCCCCGGGCAGTGTTCGTAGACCTGGAACCCACGGTCATCGATGAAGTTCGCACC
GGCACCTACCGCCAGCTCTTCCATCCTGAGCAGCTCATCACAGGCAAGGAGGATGCTGCCAATAACTATGCCCGTGGCCA
CTACACCATTGGCAAGGAGATCATTGACCTTGTCCTGGACAGGATTCGCAAGCTGGCTGACCAGTGCACGGGTCTCCAGG
GCTTCTTGGTTTTCCACAGCTTTGGTGGGGGAACTGGCTCTGGCTTCACCTCCCTGCTGATGGAGCGGCTCTCTGTGGAT
TACGGAAAGAAGTCCAAGCTGGAGTTCTCCATTTACCCAGCCCCCCAGGTTTCCACTGCTGTGGTTGAGCCCTACAATTC
CATCCTCACCACCCACACCACCCTGGAGCACTCTGATTGTGCCTTCATGGTAGACAATGAGGCCATCTATGACATCTGTC
GTAGAAACCTCGACATTGAGCGCCCAACCTACACCAACCTTAACCGCCTTATTAGCCAGATTGTGTCTTCCATCACTGCT
TCCCTCAGATTTGATGGGGCCCTGAATGTTGATCTGACAGAATTCCAGACCAACCTGGTACCCTACCCTCGCATCCACTT
CCCTCTGGCCACTTATGCCCCTGTCATCTCTGCTGAGAAAGCCTACCATGAGCAGCTTACAGTAGCAGAGATCACCAATG
CCTGCTTTGAGCCAGCCAACCAGATGGTGAAATGTGACCCTCGCCATGGTAAATACATGGCTTGCTGCCTGCTGTACCGT
GGTGATGTGGTTCCCAAAGATGTCAATGCTGCCATTGCCACCATCAAGACCAAGCGTACCATCCAGTTTGTGGACTGGTG
CCCCACTGGCTTCAAGGTTGGCATTAACTACCAGCCTCCCACTGTGGTACCCGGTGGTGACCTGGCCAAGGTGCAGAGAG
CTGTGTGCATGCTGAGCAACACCACAGCCATTGCTGAGGCCTGGGCTCGCCTAGATCACAAGTTTGATCTGATGTATGCC
AAGCGTGCCTTTGTGCACTGGTATGTGGGTGAGGGCATGGAGGAGGGTGAGTTCTCTGAGGCCCGTGAGGACATGGCTGC
CCTAGAGAAGGATTATGAGGAGGTTGGGGCAGATAGTGCTGAAGGAGACGATGAGGGTGAGGAATATTAA

Library Parental gene expression (RPM)
SRP007412_brain 1 .31 RPM
SRP007412_cerebellum 1 .65 RPM
SRP007412_heart 10 .99 RPM
SRP007412_kidney 13 .59 RPM
SRP007412_liver 28 .37 RPM
SRP007412_testis 29 .59 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000039992 ortholog_one2many 1 retrogene
retro_btau_840,
Choloepus hoffmanni ENSCHOG00000008444 possible_ortholog 2 retrogenes
retro_chof_179, retro_chof_360,
Equus caballus ENSECAG00000009504 ortholog_one2one 1 retrogene
retro_ecab_1041,
Felis catus ENSFCAG00000024852 possible_ortholog 1 retrogene
retro_fcat_361,
Felis catus ENSFCAG00000028689 possible_ortholog 3 retrogenes
retro_fcat_1802, retro_fcat_254, retro_fcat_798,
Macropus eugenii ENSMEUG00000010779 possible_ortholog 2 retrogenes
retro_meug_1648, retro_meug_2174,
Mus musculus ENSMUSG00000023004 within_species_paralog 6 retrogenes
retro_mmus_1562, retro_mmus_1607, retro_mmus_1742, retro_mmus_1987, retro_mmus_3297, retro_mmus_3327,
Mus musculus ENSMUSG00000067338 within_species_paralog 1 retrogene
retro_mmus_3356,
Oryctolagus cuniculus ENSOCUG00000028032 possible_ortholog 1 retrogene
retro_ocun_111,
Otolemur garnettii ENSOGAG00000009435 possible_ortholog 1 retrogene
retro_ogar_240,
Rattus norvegicus ENSRNOG00000015544 ortholog_one2one 3 retrogenes
retro_rnor_1193, retro_rnor_2260, retro_rnor_960,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_843 95.89 70.38
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Download FASTA sequences of all ENSMUSG00000043091 retrocopies