Parental gene:

Rap1b, ENSMUSG00000052681

Aliases:Rap1b, 2810443E11Rik
Description:RAS related protein 1b [Source:MGI Symbol;Acc:MGI:894315]
Organism:Mouse (Mus musculus)
Coordinates:10:117814470..117845935(-)


>ENSMUSG00000052681
ATGCGTGAATATAAGCTCGTCGTGCTTGGATCAGGAGGCGTTGGGAAGTCAGCCCTGACTGTACAGTTTGTTCAAGGAAT
TTTTGTTGAAAAATATGATCCTACGATAGAAGATTCTTATAGAAAGCAAGTTGAAGTAGATGCACAGCAGTGTATGCTTG
AAATCTTGGACACTGCAGGAACGGAGCAATTCACAGCCATGAGGGACCTGTACATGAAGAACGGACAAGGCTTCGCTCTG
GTTTACTCCATCACAGCACAGTCGACATTTAACGACTTACAAGATCTAAGAGAGCAGATTCTGCGGGTTAAAGACACTGA
TGATGTTCCAATGATTCTGGTTGGCAATAAATGCGACTTGGAAGATGAAAGAGTTGTAGGAAAGGAACAAGGTCAGAACC
TAGCAAGACAGTGGAACAACTGTGCATTCTTAGAATCCTCTGCAAAGTCCAAAATAAATGTTAATGAGATCTTTTATGAC
CTAGTGCGGCAAATTAACAGAAAAACTCCAGTGCCTGGGAAGGCCCGCAAAAAGTCATCGTGTCAGCTGCTTTAA

Library Parental gene expression (RPM)
SRP007412_brain 54 .88 RPM
SRP007412_cerebellum 38 .60 RPM
SRP007412_heart 50 .74 RPM
SRP007412_kidney 75 .17 RPM
SRP007412_liver 53 .52 RPM
SRP007412_testis 22 .87 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000008637 possible_ortholog 1 retrogene
retro_amel_103,
Callithrix jacchus ENSCJAG00000007261 ortholog_one2one 3 retrogenes
retro_cjac_1435, retro_cjac_2371, retro_cjac_607,
Cavia porcellus ENSCPOG00000008272 possible_ortholog 4 retrogenes
retro_cpor_1194, retro_cpor_632, retro_cpor_739, retro_cpor_85,
Gorilla gorilla ENSGGOG00000025649 ortholog_one2one 1 retrogene
retro_ggor_2836,
Loxodonta africana ENSLAFG00000016460 possible_ortholog 1 retrogene
retro_lafr_482,
Mus musculus ENSMUSG00000068798 within_species_paralog 2 retrogenes
retro_mmus_1963, retro_mmus_3027,
Nomascus leucogenys ENSNLEG00000003573 ortholog_one2one 2 retrogenes
retro_nleu_1034, retro_nleu_481,
Otolemur garnettii ENSOGAG00000005746 ortholog_one2one 2 retrogenes
retro_ogar_2260, retro_ogar_272,
Sarcophilus harrisii ENSSHAG00000011497 ortholog_one2one 1 retrogene
retro_shar_425,
Sus scrofa ENSSSCG00000030014 possible_ortholog 2 retrogenes
retro_sscr_435, retro_sscr_909,
Tupaia belangeri ENSTBEG00000013380 ortholog_one2one 4 retrogenes
retro_tbel_2145, retro_tbel_4650, retro_tbel_4658, retro_tbel_613,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_1370 73.39 66.85
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Download FASTA sequences of all ENSMUSG00000052681 retrocopies