Parental gene:

EEF1A2, ENSOANG00000004908

Aliases:None
Description:eukaryotic translation elongation factor 1 alpha 2 [Source:HGNC Symbol;Acc:3192]
Organism:Platypus (Ornithorhynchus anatinus)
Coordinates:Ultra337:1670569..1702830(-)


>ENSOANG00000004908
ATGGGAAAGGAAAAGACCCACATCAACATCGTGGTCATTGGACATGTTGACTCTGGAAAATCCACCACCACAGGGCACCT
CATCTACAAATGTGGGGGCATTGACAAGAGAACGATCGAAAAATTCGAGAAGGAGGCAGCTGAGATGGGGAAAGGCTCCT
TTAAATATGCCTGGGTCCTGGACAAGCTGAAAGCTGAACGTGAACGAGGCATCACCATTGACATTTCCCTCTGGAAGTTT
GAGACGACCAAATACTACATCACCATCATTGATGCCCCTGGACACAGAGACTTCATCAAGAACATGATTACTGGAACATC
CCAGGCTGACTGTGCAGTCCTAATTGTGGCTGCCGGCGTGGGTGAGTTCGAAGCTGGTATCTCCAAAAATGGGCAGACTC
GTGAGCATGCCCTGTTGGCTTACACCTTGGGGGTGAAACAGCTCATTGTGGGGATCAACAAGATGGACTCCACAGAGCCC
CCCTACAGCGAGAAGCGTTACGATGAAATTGTCAAGGAGGTCAGCGCCTACATCAAGAAGATTGGCTACAACCCTGCCAC
AGTCCCCTTTGTGCCCATCTCCGGTTGGCACGGAGACAACATGTTGGAACCCTCTCCTAACATGCCTTGGTTTAAGGGCT
GGAAGGTAGAGCGGAAGGAAGGCAACGCCAGTGGAGTATCCCTGCTGGAAGCCCTGGACACCATCCTGCCTCCAACCCGC
CCCACAGATAAGCCCCTGCGTCTTCCCCTTCAAGATGTCTACAAGATTGGAGGCATCGGGACCGTCCCGGTGGGCCGGGT
GGAGACCGGGATCCTGAGACCTGGGATGGTAGTGACCTTTGCCCCGGTGAACATCACCACAGAGGTGAAGTCGGTGGAGA
TGCACCACGAGGCCCTAAGCGAGGCCCTGCCAGGAGACAACGTCGGCTTCAACGTGAAGAACGTGTCCGTGAAGGACATC
CGCCGGGGCAACGTCTGCGGAGACAGCAAGTCCGACCCACCCCAGGAAGCAGCTCAGTTCACTTCCCAGGTGATTATTCT
AAATCACCCTGGCCAGATCAGCGCTGGGTACTCCCCTGTCATCGACTGCCACACAGCCCACATTGCCTGCAAGTTCGCCG
AGCTGAAGGAGAAGATTGACCGACGTTCTGGCAAGAAGCTGGAGGACAACCCCAAGTCCTTGAAATCTGGGGATGCCGCC
ATCGTGGAGATGATCCCGGGAAAACCTATGTGTGTGGAGAGCTTCTCCCAGTACCCACCCCTTGGCCGCTTTGCCGTGCG
CGACATGAGGCAGACCGTGGCCGTGGGCGTCATCAAGAACGTGGAGAAGAAGAGCGGTGGGGCTGGCAAGGTCACCAAGT
CTGCACAGAAGGCCCAGAAGGCTGGCAAATGA

Library Parental gene expression (RPM)
SRP007412_brain 1050 .65 RPM
SRP007412_cerebellum 1428 .69 RPM
SRP007412_heart 1568 .97 RPM
SRP007412_kidney 36 .72 RPM
SRP007412_liver 33 .45 RPM
SRP007412_testis 49 .10 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000013249 possible_ortholog 1 retrogene
retro_cfam_1007,
Equus caballus ENSECAG00000022260 possible_ortholog 1 retrogene
retro_ecab_802,
Latimeria chalumnae ENSLACG00000002952 possible_ortholog 1 retrogene
retro_lcha_39,
Loxodonta africana ENSLAFG00000028081 possible_ortholog 1 retrogene
retro_lafr_651,
Macropus eugenii ENSMEUG00000005018 ortholog_one2one 23 retrogenes
retro_meug_1067, retro_meug_110, retro_meug_1160, retro_meug_1240, retro_meug_1334, retro_meug_135, retro_meug_1421, retro_meug_1451, retro_meug_1465, retro_meug_1501, retro_meug_1662, retro_meug_1690, retro_meug_1710, retro_meug_1829, retro_meug_2023, retro_meug_2044, retro_meug_2050, retro_meug_316, retro_meug_601, retro_meug_755, retro_meug_792, retro_meug_850, retro_meug_920,
Myotis lucifugus ENSMLUG00000016760 ortholog_one2one 1 retrogene
retro_mluc_1250,
Mustela putorius furo ENSMPUG00000008289 ortholog_one2one 3 retrogenes
retro_mputfur_1030, retro_mputfur_609, retro_mputfur_761,
Nomascus leucogenys ENSNLEG00000010060 ortholog_one2one 2 retrogenes
retro_nleu_11, retro_nleu_1489,
Otolemur garnettii ENSOGAG00000004630 ortholog_one2one 8 retrogenes
retro_ogar_1067, retro_ogar_2034, retro_ogar_2329, retro_ogar_2497, retro_ogar_2583, retro_ogar_3191, retro_ogar_3270, retro_ogar_643,
Ictidomys tridecemlineatus ENSSTOG00000028862 ortholog_one2one 1 retrogene
retro_itri_1028,
Tursiops truncatus ENSTTRG00000001835 ortholog_one2one 1 retrogene
retro_ttru_993,
Drosophila melanogaster FBgn0000557 ortholog_many2many 1 retrogene
retro_dmel_9,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_oana_73 70.89 50.97
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Download FASTA sequences of all ENSOANG00000004908 retrocopies