Parental gene: | ox_plat1_531208, ENSOANG00000020728 |
| Aliases: | None |
| Description: | None |
| Organism: | Platypus (Ornithorhynchus anatinus) |
| Coordinates: | Contig48:203308..457832(+) |
>ENSOANG00000020728
CTGTCATCTGCAGGTCACCTGAGGTTTTGCCTTTTGATTCTTAACCAGCCTTTGGACAAAGACCATCTTCATCATTTGTG
GAGCAAAGCCCTGTTGAAAGCCTGCGCAGATGGAGGGGCAAATCGTTTACATCAAATCACCGACGGAAAGCAAGAGAGCT
TCTTGCCTGATTACATCAGTGGAGACTTTGATTCTATTAGGCCCGAAGTCATGGAGTATTACAAGGTCAAGGGATGTGAG
TTAATTGAGACTGCTGATCAGAATTTCACGGACTTCACTAAGTGTTTAAAAGTGCTCCTAGAGAAGATAAAAGAAAAGGA
CCTGCAGGTTGATATGATTGTGACATTGGGCGGACTTGGAGGACGTTTTGACCAGATTATGGCTTCCGTGGAGACCCTCT
TTCATGCGACCAGCCTCACCTCATTGCCTATTGTAGTGATCCAAGAAGACTCCCTCGTCTACCTGCTTCAGCCAGGGAAG
CACAGACTGCAGGTTAACACCGGATTGGAAGGGGAATGGTGTGGCCTCATTCCAGTTGGATTTCCTTGCCGCGTCACTAC
CACGGGACTCAAGTGGAACCTCACTAACAGCGAGCTCAAGTTCGGAACGCTGGTCAGCACTTCGAACACCTACGACGGAT
CTGACGACGTAACGGTGGAAACAGATCATCCACTCATCTGGACCATGGGCGTCCGG
CTGTCATCTGCAGGTCACCTGAGGTTTTGCCTTTTGATTCTTAACCAGCCTTTGGACAAAGACCATCTTCATCATTTGTG
GAGCAAAGCCCTGTTGAAAGCCTGCGCAGATGGAGGGGCAAATCGTTTACATCAAATCACCGACGGAAAGCAAGAGAGCT
TCTTGCCTGATTACATCAGTGGAGACTTTGATTCTATTAGGCCCGAAGTCATGGAGTATTACAAGGTCAAGGGATGTGAG
TTAATTGAGACTGCTGATCAGAATTTCACGGACTTCACTAAGTGTTTAAAAGTGCTCCTAGAGAAGATAAAAGAAAAGGA
CCTGCAGGTTGATATGATTGTGACATTGGGCGGACTTGGAGGACGTTTTGACCAGATTATGGCTTCCGTGGAGACCCTCT
TTCATGCGACCAGCCTCACCTCATTGCCTATTGTAGTGATCCAAGAAGACTCCCTCGTCTACCTGCTTCAGCCAGGGAAG
CACAGACTGCAGGTTAACACCGGATTGGAAGGGGAATGGTGTGGCCTCATTCCAGTTGGATTTCCTTGCCGCGTCACTAC
CACGGGACTCAAGTGGAACCTCACTAACAGCGAGCTCAAGTTCGGAACGCTGGTCAGCACTTCGAACACCTACGACGGAT
CTGACGACGTAACGGTGGAAACAGATCATCCACTCATCTGGACCATGGGCGTCCGG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 1 .77 RPM |
| SRP007412_cerebellum | 1 .40 RPM |
| SRP007412_heart | 1 .86 RPM |
| SRP007412_kidney | 7 .40 RPM |
| SRP007412_liver | 4 .07 RPM |
| SRP007412_testis | 4 .15 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000001227 | ortholog_one2one | 23 retrogenes |
retro_chof_1004, retro_chof_1093, retro_chof_1416, retro_chof_1458, retro_chof_1537, retro_chof_1683, retro_chof_1732, retro_chof_191, retro_chof_1927, retro_chof_2202, retro_chof_2413, retro_chof_2507, retro_chof_2577, retro_chof_468, retro_chof_472, retro_chof_550, retro_chof_630, retro_chof_665, retro_chof_701, retro_chof_801, retro_chof_917, retro_chof_954, retro_chof_988,
|
| Dasypus novemcinctus | ENSDNOG00000018545 | ortholog_one2one | 4 retrogenes | |
| Macropus eugenii | ENSMEUG00000010062 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000004213 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000025468 | ortholog_one2many | 2 retrogenes | |
| Vicugna pacos | ENSVPAG00000010214 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_oana_44 | 90.62 | 55.17 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOANG00000020728 retrocopies