Parental gene:

TPK1, ENSVPAG00000010214

Aliases:None
Description:thiamin pyrophosphokinase 1 [Source:HGNC Symbol;Acc:17358]
Organism:Alpaca (Vicugna pacos)
Coordinates:GeneScaffold_3340:10373..288098(-)


>ENSVPAG00000010214
AATTTGAAATACTGCCTTGTGATTCTGAACCAGCCTTTGGACAAATGTTTTCGTCGTCTTTGGCACAAAGCTCTTTTAAG
AGCCTGTGCTGACGGAGGTGCCAACCGCTTGTATGATGCCACGGAGGGAGAGAGGGAGAGCTTTTTGCCTGAATTCATCA
GTGGAGACTTTGATTCTATTAGGCCCGAAGTTAGCGAATACTACGCTATTAAGGGATGTGAACTTATTTCAACTCCTGAT
CAAGACCATACTGACTTTACCAAGTGCCTTGAAGTGCTCCAAAAGAAGATAGCAGAAGAAGACCTACAGGTGGATGTGAT
TGTGACCTTGGGAGGACTTGCTGGCCGTTTTGACCAGATTATGGCATCTGTGAGCACCTTGTTCCAAGCAACTCGCATCA
CTCCTTTGCCGGTTACAATTATCCAAGAGGAATCGCTCATCTACCTGCTCCAACCCGGAAAACACAAATTGTGTGTAGAC
ACCGGACTGGAAGGTGAGTGGTGTGGCCTTATTCCTGTTGGACAGCCATGCAAGCGGGTTACAACGACAGGCCTGAAGTG
GAACCTCACAAATCACATGCTTAGTTTTGGAACACTGGTCAGTACTTCCAATACCTACGATGGATCTGGCGTTGTGACTG
TGGAAACGGACCATCCCCTCCTCTGGACCATGGCCATCAAAACCTGA

Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000001227 ortholog_one2one 23 retrogenes
retro_chof_1004, retro_chof_1093, retro_chof_1416, retro_chof_1458, retro_chof_1537, retro_chof_1683, retro_chof_1732, retro_chof_191, retro_chof_1927, retro_chof_2202, retro_chof_2413, retro_chof_2507, retro_chof_2577, retro_chof_468, retro_chof_472, retro_chof_550, retro_chof_630, retro_chof_665, retro_chof_701, retro_chof_801, retro_chof_917, retro_chof_954, retro_chof_988,
Dasypus novemcinctus ENSDNOG00000018545 ortholog_one2one 4 retrogenes
retro_dnov_1080, retro_dnov_1592, retro_dnov_2405, retro_dnov_2523,
Macropus eugenii ENSMEUG00000010062 ortholog_one2one 1 retrogene
retro_meug_1153,
Myotis lucifugus ENSMLUG00000004213 ortholog_one2one 1 retrogene
retro_mluc_1071,
Monodelphis domestica ENSMODG00000025468 ortholog_one2many 2 retrogenes
retro_mdom_1299, retro_mdom_1300,
Ornithorhynchus anatinus ENSOANG00000020728 ortholog_one2one 1 retrogene
retro_oana_44,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_vpac_205 58.82 50.88
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2. retro_vpac_503 61.14 75.00
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Download FASTA sequences of all ENSVPAG00000010214 retrocopies