Parental gene: | RPS23, ENSOGAG00000008163 |
| Aliases: | None |
| Description: | ribosomal protein S23 [Source:HGNC Symbol;Acc:10410] |
| Organism: | Bushbaby (Otolemur garnettii) |
| Coordinates: | GL873536.1:16166363..16167562(-) |
>ENSOGAG00000008163
CTAGGCAAGTGTCGTGGGCTCCGAACTGCTAGGAAGCTCCGCAGTCACAGACGAGACCAAAAGTGGCATGATAAACAGTA
CAAGAAGGCCCATCTGGGCACAGCCCTGAAGGCCAACCCTTTCGGAGGTGCTTCCCATGCAAAGGGGATTGTGTTGGAAA
AAGTAGGAGTTGAAGCCAAACAGCCAAATTCTGCCATCAGGAAGTGTGTCAGGGTCCAGCTGATCAAGAATGGCAAGAAA
ATCACAGCATTTGTACCCAACGATGGTTGCTTGAACTTTATTGAGGAAAACGATGAAGTTCTGGTTGCTGGATTTGGTCG
AAAAGGTCATGCCGTTGGTGACATTCCTGGAGTCCGCTTTAAGGTTGTCAAAGTAGCTAATGTGTCTCTTCTGGCCCTTT
ACAAAGGCAAGAAGGAACGACCAAGATCATAA
CTAGGCAAGTGTCGTGGGCTCCGAACTGCTAGGAAGCTCCGCAGTCACAGACGAGACCAAAAGTGGCATGATAAACAGTA
CAAGAAGGCCCATCTGGGCACAGCCCTGAAGGCCAACCCTTTCGGAGGTGCTTCCCATGCAAAGGGGATTGTGTTGGAAA
AAGTAGGAGTTGAAGCCAAACAGCCAAATTCTGCCATCAGGAAGTGTGTCAGGGTCCAGCTGATCAAGAATGGCAAGAAA
ATCACAGCATTTGTACCCAACGATGGTTGCTTGAACTTTATTGAGGAAAACGATGAAGTTCTGGTTGCTGGATTTGGTCG
AAAAGGTCATGCCGTTGGTGACATTCCTGGAGTCCGCTTTAAGGTTGTCAAAGTAGCTAATGTGTCTCTTCTGGCCCTTT
ACAAAGGCAAGAAGGAACGACCAAGATCATAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000011136 | ortholog_one2one | 1 retrogene | |
| Ailuropoda melanoleuca | ENSAMEG00000015966 | ortholog_one2one | 3 retrogenes | |
| Bos taurus | ENSBTAG00000013358 | possible_ortholog | 3 retrogenes | |
| Callithrix jacchus | ENSCJAG00000011247 | possible_ortholog | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000022705 | ortholog_one2one | 2 retrogenes | |
| Dipodomys ordii | ENSDORG00000001813 | possible_ortholog | 2 retrogenes | |
| Equus caballus | ENSECAG00000020523 | ortholog_one2one | 2 retrogenes | |
| Erinaceus europaeus | ENSEEUG00000001849 | ortholog_one2one | 7 retrogenes | |
| Felis catus | ENSFCAG00000008839 | ortholog_one2one | 7 retrogenes | |
| Loxodonta africana | ENSLAFG00000031506 | ortholog_one2one | 3 retrogenes | |
| Macropus eugenii | ENSMEUG00000012931 | possible_ortholog | 1 retrogene | |
| Microcebus murinus | ENSMICG00000013964 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000013939 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000003578 | possible_ortholog | 4 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000010363 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000017052 | ortholog_one2one | 6 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000002083 | possible_ortholog | 4 retrogenes | |
| Rattus norvegicus | ENSRNOG00000016580 | ortholog_one2one | 12 retrogenes | |
| Sorex araneus | ENSSARG00000008904 | ortholog_one2one | 8 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000008347 | possible_ortholog | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000000824 | ortholog_one2one | 3 retrogenes | |
| Tarsius syrichta | ENSTSYG00000011385 | ortholog_one2one | 5 retrogenes | |
| Tursiops truncatus | ENSTTRG00000014491 | ortholog_one2one | 6 retrogenes | |
| Vicugna pacos | ENSVPAG00000009427 | possible_ortholog | 7 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ogar_238 | 93.89 | 91.61 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ogar_253 | 89.58 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ogar_364 | 75.19 | 90.21 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ogar_1177 | 63.31 | 96.50 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_ogar_1303 | 95.04 | 84.62 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_ogar_1785 | 77.62 | 99.30 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_ogar_1849 | 87.41 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_ogar_2479 | 79.31 | 80.42 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_ogar_2695 | 74.53 | 72.03 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_ogar_2823 | 91.67 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_ogar_3519 | 52.29 | 74.83 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOGAG00000008163 retrocopies