Parental gene: | SSBP1, ENSOGAG00000016661 |
| Aliases: | None |
| Description: | single-stranded DNA binding protein 1, mitochondrial [Source:HGNC Symbol;Acc:11317] |
| Organism: | Bushbaby (Otolemur garnettii) |
| Coordinates: | GL873568.1:3228409..3238919(-) |
>ENSOGAG00000016661
ATGTTTCGAAGACCTGTATTTAAGGTACTTCATCAGTTTGTAAGACATGAGTCTGAAATAGCTAGCAGTTTAGTTCTGGA
AAGATCCTTAAATCGTGTGCAGTTACTTGGGCGAGTGGGTCAGGACCCTGTCATGAGACAGGTGGAAGGGAAAAATCCAG
TCACAATATTTTCTCTAGCAACAAATGAGATGTGGCGATCAGGGGACAGTGAAGTATACCAAATGGGTGATGTCAGTCAA
AAGACTACATGGCACAGAATATCAGTATTCCGGCCAGGCCTCAGAGATGTGGCCTATCAGTATGTGAAAAAGGGGTCTCG
GATTTATGTTGAAGGGAAAGTAGACTATGGAGAATACACGGATAAAAATAATGTGAGGCGACAAGCAACAACAATCATAG
CTGATAATATTATATTTCTGAGTGACCAGGCAAAAGAGAAGGAATAG
ATGTTTCGAAGACCTGTATTTAAGGTACTTCATCAGTTTGTAAGACATGAGTCTGAAATAGCTAGCAGTTTAGTTCTGGA
AAGATCCTTAAATCGTGTGCAGTTACTTGGGCGAGTGGGTCAGGACCCTGTCATGAGACAGGTGGAAGGGAAAAATCCAG
TCACAATATTTTCTCTAGCAACAAATGAGATGTGGCGATCAGGGGACAGTGAAGTATACCAAATGGGTGATGTCAGTCAA
AAGACTACATGGCACAGAATATCAGTATTCCGGCCAGGCCTCAGAGATGTGGCCTATCAGTATGTGAAAAAGGGGTCTCG
GATTTATGTTGAAGGGAAAGTAGACTATGGAGAATACACGGATAAAAATAATGTGAGGCGACAAGCAACAACAATCATAG
CTGATAATATTATATTTCTGAGTGACCAGGCAAAAGAGAAGGAATAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000015145 | ortholog_one2one | 3 retrogenes | |
| Bos taurus | ENSBTAG00000010931 | ortholog_one2one | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000003885 | ortholog_one2one | 7 retrogenes | |
| Callithrix jacchus | ENSCJAG00000013650 | ortholog_one2one | 3 retrogenes | |
| Cavia porcellus | ENSCPOG00000003354 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000015867 | ortholog_one2one | 15 retrogenes | |
| Dipodomys ordii | ENSDORG00000015161 | ortholog_one2one | 2 retrogenes | |
| Equus caballus | ENSECAG00000004023 | ortholog_one2one | 4 retrogenes | |
| Erinaceus europaeus | ENSEEUG00000010837 | ortholog_one2one | 2 retrogenes | |
| Felis catus | ENSFCAG00000006568 | ortholog_one2one | 8 retrogenes | |
| Homo sapiens | ENSG00000106028 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000009615 | ortholog_one2one | 3 retrogenes | |
| Loxodonta africana | ENSLAFG00000011526 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000007133 | ortholog_one2one | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000022442 | ortholog_one2one | 3 retrogenes | |
| Mustela putorius furo | ENSMPUG00000003257 | ortholog_one2one | 5 retrogenes | |
| Mus musculus | ENSMUSG00000029911 | ortholog_one2one | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000002361 | ortholog_one2many | 2 retrogenes | |
| Procavia capensis | ENSPCAG00000003383 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000018068 | ortholog_one2one | 4 retrogenes | |
| Pan troglodytes | ENSPTRG00000019778 | ortholog_one2one | 3 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000006221 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000012100 | ortholog_one2one | 4 retrogenes | |
| Sus scrofa | ENSSSCG00000016488 | ortholog_one2one | 3 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000007007 | ortholog_one2one | 4 retrogenes | |
| Vicugna pacos | ENSVPAG00000003679 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ogar_757 | 61.67 | 79.73 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ogar_1021 | 97.44 | 79.05 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ogar_1085 | 96.62 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ogar_1729 | 95.27 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_ogar_1806 | 70.11 | 58.78 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_ogar_1958 | 83.01 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_ogar_2345 | 73.33 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_ogar_2572 | 66.33 | 65.54 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_ogar_3020 | 71.17 | 73.65 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOGAG00000016661 retrocopies