RetrogeneDB ID: | retro_ogar_2345 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873613.1:7724472..7724903(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SSBP1 | ||
Ensembl ID: | ENSOGAG00000016661 | ||
Aliases: | None | ||
Description: | single-stranded DNA binding protein 1, mitochondrial [Source:HGNC Symbol;Acc:11317] |
Percent Identity: | 73.33 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MFRRPVFKVLHQFVRHESEIASSLVLERSLNRVQLLGRV-GQDPVMRQVEGKNPVT-IFSLATNEMWRSG |
MFRRPVF..LHQFVRHESEIASS.VLERS.N.V.LLGRV.G..P..R...G........S.ATNEMWRSG | |
Retrocopy | MFRRPVFQELHQFVRHESEIASSSVLERSSNLVRLLGRV<GSGP--RHETGRREISQLSSPATNEMWRSG |
Parental | DSEVYQMGDVSQKTTWHRISVFRPGLRDVAYQYVKKGSRIYVEGKVDYGEYTDKNNVRRQATTIIADNII |
DS.V...GDVSQ.TT.HRISVF.PGLRDVA.QY.K.GSRIYVEGKVDYGEYTDKNNVR.QAT.I.AD.I. | |
Retrocopy | DSDV---GDVSQRTTRHRISVFQPGLRDVADQYEKRGSRIYVEGKVDYGEYTDKNNVR*QATAIMADSIM |
Parental | FLSDQAKEKE |
.LSDQAKE.E | |
Retrocopy | CLSDQAKEEE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |