Parental gene: | RPS4X, ENSTSYG00000003137 |
| Aliases: | None |
| Description: | ribosomal protein S4, X-linked [Source:HGNC Symbol;Acc:10424] |
| Organism: | Tarsier (Tarsius syrichta) |
| Coordinates: | scaffold_51861:2959..8555(-) |
>ENSTSYG00000003137
ATGGCTCGTGGTCCCAAGAAGCATCTGAAGCGGGTAGCAGCTCCTAAGCATTGGATGCTGGATAAATTGACCGGTGTGTT
TGCTCCTCGTCCATCCACTCCCCACAAGCTGAGAGAATGTCTTCCTCTCATCATTTTTAGAAACAGACTTAAGTATGCTC
TGACTGGAGATGAAGTAAAAAAGATCTGCATGCAGCGGTTCATTAAGATCGATGGCAAGGTCCGAACTGATATAACCTAC
CCTGCTGGTTTTATGGATGTCATCAGCATTGACAAGACTGGAGAGAACTTCCGCCTGATCTATGACACCAAGGGTCGGTT
TGCTGTTCATCGTATCACACCTGAGGAGGCCAAGTACAAGTTGTGCAAAGTAAGAAAGATCTTTGTGGGCACAAAAGGAA
TTCCTCATCTGGTGACTCATGATGCTCGCACCATCCGCTACCCTGATCCCCTTATCAAGGTGAATGACACCATTCAGATT
GATTTGGAGGCTGGCAAAATTACTGATTTTATCAAGTTTGACACTGGTAACCTGTGTATGGTGACTGGAGGTGCTAACCT
GAGAATTGGTGTGATCACCAACAGAGAAAGACATCCTGGATCTTTTGATGTGGTTCATGTAAAAGATGCCTATGGCAACA
GCTTTGCCACTCGGCTCTCCAACATTTTTGTTATTGACAAAGGTAACAAACCATGGATTTCTCTTCCCAGAGGAAAAGGT
ATCCGCCTCACCATTGCTGAAGAGAGAGACAAAAGACTGGCAGCCAAACAGAGCAGTGGGTGA
ATGGCTCGTGGTCCCAAGAAGCATCTGAAGCGGGTAGCAGCTCCTAAGCATTGGATGCTGGATAAATTGACCGGTGTGTT
TGCTCCTCGTCCATCCACTCCCCACAAGCTGAGAGAATGTCTTCCTCTCATCATTTTTAGAAACAGACTTAAGTATGCTC
TGACTGGAGATGAAGTAAAAAAGATCTGCATGCAGCGGTTCATTAAGATCGATGGCAAGGTCCGAACTGATATAACCTAC
CCTGCTGGTTTTATGGATGTCATCAGCATTGACAAGACTGGAGAGAACTTCCGCCTGATCTATGACACCAAGGGTCGGTT
TGCTGTTCATCGTATCACACCTGAGGAGGCCAAGTACAAGTTGTGCAAAGTAAGAAAGATCTTTGTGGGCACAAAAGGAA
TTCCTCATCTGGTGACTCATGATGCTCGCACCATCCGCTACCCTGATCCCCTTATCAAGGTGAATGACACCATTCAGATT
GATTTGGAGGCTGGCAAAATTACTGATTTTATCAAGTTTGACACTGGTAACCTGTGTATGGTGACTGGAGGTGCTAACCT
GAGAATTGGTGTGATCACCAACAGAGAAAGACATCCTGGATCTTTTGATGTGGTTCATGTAAAAGATGCCTATGGCAACA
GCTTTGCCACTCGGCTCTCCAACATTTTTGTTATTGACAAAGGTAACAAACCATGGATTTCTCTTCCCAGAGGAAAAGGT
ATCCGCCTCACCATTGCTGAAGAGAGAGACAAAAGACTGGCAGCCAAACAGAGCAGTGGGTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000014601 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000018800 | possible_ortholog | 5 retrogenes | |
| Canis familiaris | ENSCAFG00000017151 | possible_ortholog | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000006337 | possible_ortholog | 3 retrogenes | |
| Dipodomys ordii | ENSDORG00000008571 | ortholog_one2one | 4 retrogenes | |
| Equus caballus | ENSECAG00000010852 | possible_ortholog | 6 retrogenes | |
| Homo sapiens | ENSG00000129824 | possible_ortholog | 1 retrogene | |
| Meleagris gallopavo | ENSMGAG00000009671 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000011685 | ortholog_one2one | 5 retrogenes | |
| Monodelphis domestica | ENSMODG00000011070 | possible_ortholog | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000005294 | possible_ortholog | 11 retrogenes | |
| Otolemur garnettii | ENSOGAG00000011808 | possible_ortholog | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000022470 | possible_ortholog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000003201 | possible_ortholog | 1 retrogene | |
| Vicugna pacos | ENSVPAG00000010952 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_tsyr_118 | 94.42 | 95.38 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_tsyr_409 | 72.22 | 61.15 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_tsyr_440 | 95.27 | 64.62 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_tsyr_522 | 70.39 | 87.31 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_tsyr_529 | 81.35 | 73.46 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_tsyr_750 | 70.15 | 51.15 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_tsyr_917 | 82.55 | 88.46 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_tsyr_1159 | 85.71 | 55.77 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_tsyr_1167 | 75.29 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_tsyr_1302 | 95.83 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_tsyr_1333 | 78.03 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 12. | retro_tsyr_1774 | 76.40 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 13. | retro_tsyr_1792 | 69.02 | 69.62 | Please wait, loading | Please wait, loading | Please wait, loading |
| 14. | retro_tsyr_1931 | 92.59 | 51.15 | Please wait, loading | Please wait, loading | Please wait, loading |
| 15. | retro_tsyr_1936 | 84.09 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 16. | retro_tsyr_2116 | 78.82 | 64.23 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSTSYG00000003137 retrocopies