RetrogeneDB ID: | retro_mluc_2253 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL430149:418409..418933(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMLUG00000028735 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS4X | ||
Ensembl ID: | ENSMLUG00000011685 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 74.44 % |
Parental protein coverage: | 67.3 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | MARGPKKHLKRVAAPKHWMLDKLT-GVFAPRPSTGPHKLRECLPLIIF-LRNRLKYALTGDEVKKICMQR |
.A.GPKKHL..V.AP..W.LD.LT.GVFA.RPSTGPHKLRECLPLIIF.L.NRL.YALTGDE..KI..QR | |
Retrocopy | LAHGPKKHLRCVVAPERWVLDTLT<GVFASRPSTGPHKLRECLPLIIF<LWNRLNYALTGDE-GKISTQR |
Parental | FIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH |
FIKID.KV.T..T.PAGFMDVISIDKT.ENFRLI.DTKGRFAVHRI.PEEAKY.LCKVR..FVGT.GI.. | |
Retrocopy | FIKIDDKVQTEVTHPAGFMDVISIDKTSENFRLICDTKGRFAVHRIVPEEAKYRLCKVRRVFVGTRGILD |
Parental | LVTHDARTIRYP-DPLIKVNDTIQIDLETGKITDFIKFDT |
.V..D..TI..P.DPL.KVNDTIQ.DLETGK.TD.IK..T | |
Retrocopy | RVAYDVHTISLP>DPL-KVNDTIQVDLETGKMTDVIKCGT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |