Parental gene:

RPS4X, ENSMLUG00000011685

Aliases:None
Description:None
Organism:Microbat (Myotis lucifugus)
Coordinates:GL429771:11883581..11888101(+)


>ENSMLUG00000011685
ATGGCTCGTGGTCCCAAGAAGCATCTGAAGCGTGTAGCAGCTCCAAAGCATTGGATGCTGGATAAACTGACTGGTGTGTT
TGCTCCTCGGCCATCTACCGGTCCCCACAAGCTGAGAGAATGTCTCCCTCTCATCATTTTCTTAAGGAACAGACTTAAGT
ATGCTCTAACAGGAGATGAAGTAAAGAAGATCTGCATGCAGCGGTTTATTAAGATTGATGGCAAGGTCCGAACCGATATA
ACCTACCCTGCTGGTTTTATGGATGTCATCAGCATTGACAAGACTGGAGAGAACTTCCGCCTGATCTATGACACTAAGGG
CCGCTTTGCAGTTCATCGTATTACTCCTGAGGAGGCCAAGTACAAGTTGTGCAAAGTGAGGAAGATCTTTGTGGGCACAA
AAGGAATCCCTCATCTGGTAACCCATGATGCTCGCACCATCCGCTACCCTGATCCCCTCATCAAGGTGAACGACACCATT
CAGATTGATTTGGAGACAGGCAAAATTACTGATTTCATCAAGTTTGACACTGGTAACTTGTGCATGGTGACCGGCGGTGC
TAACCTGGGAAGAATTGGCATAATCACCAACAGGGAGAGGCATCCTGGTTCTTTTGACGTAGTTCATGTGAAAGATGCCA
ATGGCAACAGTTTTGCCACCCGGCTCTCCAACATTTTTGTAATTGGCAAAGGCAACAAACCATGGATTTCCTTACCCCGT
GGAAAGGGTATCCGCCTCACCATTGCTGAAGAGAGAGACAAGAGACTGGCGGCCAAACAGAGCAGTGGCTGA

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000014601 ortholog_one2many 1 retrogene
retro_acar_82,
Bos taurus ENSBTAG00000018800 possible_ortholog 5 retrogenes
retro_btau_119, retro_btau_125, retro_btau_146, retro_btau_33, retro_btau_76,
Canis familiaris ENSCAFG00000017151 possible_ortholog 2 retrogenes
retro_cfam_165, retro_cfam_194,
Cavia porcellus ENSCPOG00000006337 possible_ortholog 3 retrogenes
retro_cpor_1023, retro_cpor_1075, retro_cpor_31,
Dipodomys ordii ENSDORG00000008571 ortholog_one2one 4 retrogenes
retro_dord_289, retro_dord_650, retro_dord_68, retro_dord_745,
Equus caballus ENSECAG00000010852 possible_ortholog 6 retrogenes
retro_ecab_34, retro_ecab_435, retro_ecab_443, retro_ecab_614, retro_ecab_757, retro_ecab_850,
Homo sapiens ENSG00000129824 possible_ortholog 1 retrogene
retro_hsap_1704,
Loxodonta africana ENSLAFG00000002654 possible_ortholog 4 retrogenes
retro_lafr_1007, retro_lafr_1081, retro_lafr_1238, retro_lafr_208,
Macropus eugenii ENSMEUG00000007969 possible_ortholog 16 retrogenes
retro_meug_131, retro_meug_141, retro_meug_1644, retro_meug_1732, retro_meug_1814, retro_meug_194, retro_meug_2098, retro_meug_2121, retro_meug_228, retro_meug_562, retro_meug_628, retro_meug_673, retro_meug_843, retro_meug_872, retro_meug_972, retro_meug_999,
Meleagris gallopavo ENSMGAG00000009671 ortholog_many2many 1 retrogene
retro_mgal_3,
Monodelphis domestica ENSMODG00000011070 possible_ortholog 1 retrogene
retro_mdom_238,
Mustela putorius furo ENSMPUG00000005294 possible_ortholog 11 retrogenes
retro_mputfur_1044, retro_mputfur_1176, retro_mputfur_1325, retro_mputfur_1326, retro_mputfur_1393, retro_mputfur_160, retro_mputfur_205, retro_mputfur_48, retro_mputfur_725, retro_mputfur_876, retro_mputfur_988,
Otolemur garnettii ENSOGAG00000011808 possible_ortholog 2 retrogenes
retro_ogar_121, retro_ogar_229,
Procavia capensis ENSPCAG00000000761 possible_ortholog 3 retrogenes
retro_pcap_334, retro_pcap_35, retro_pcap_360,
Pan troglodytes ENSPTRG00000022470 possible_ortholog 1 retrogene
retro_ptro_1153,
Pteropus vampyrus ENSPVAG00000012882 possible_ortholog 21 retrogenes
retro_pvam_1021, retro_pvam_1082, retro_pvam_1158, retro_pvam_1264, retro_pvam_1298, retro_pvam_1312, retro_pvam_1327, retro_pvam_1364, retro_pvam_1419, retro_pvam_177, retro_pvam_191, retro_pvam_214, retro_pvam_219, retro_pvam_335, retro_pvam_473, retro_pvam_628, retro_pvam_714, retro_pvam_809, retro_pvam_835, retro_pvam_921, retro_pvam_930,
Rattus norvegicus ENSRNOG00000003201 possible_ortholog 1 retrogene
retro_rnor_135,
Ictidomys tridecemlineatus ENSSTOG00000028692 possible_ortholog 8 retrogenes
retro_itri_1179, retro_itri_1607, retro_itri_291, retro_itri_306, retro_itri_368, retro_itri_495, retro_itri_738, retro_itri_985,
Tarsius syrichta ENSTSYG00000003137 ortholog_one2one 16 retrogenes
retro_tsyr_1159, retro_tsyr_1167, retro_tsyr_118, retro_tsyr_1302, retro_tsyr_1333, retro_tsyr_1774, retro_tsyr_1792, retro_tsyr_1931, retro_tsyr_1936, retro_tsyr_2116, retro_tsyr_409, retro_tsyr_440, retro_tsyr_522, retro_tsyr_529, retro_tsyr_750, retro_tsyr_917,
Vicugna pacos ENSVPAG00000010952 ortholog_one2one 4 retrogenes
retro_vpac_244, retro_vpac_460, retro_vpac_604, retro_vpac_653,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mluc_301 95.77 98.86
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2. retro_mluc_536 91.22 55.89
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3. retro_mluc_736 80.75 60.46
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4. retro_mluc_1638 91.67 100.00
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5. retro_mluc_2253 74.44 67.30
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Download FASTA sequences of all ENSMLUG00000011685 retrocopies