RetrogeneDB ID: | retro_mluc_736 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429773:6503790..6504269(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS4X | ||
Ensembl ID: | ENSMLUG00000011685 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 80.75 % |
Parental protein coverage: | 60.46 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | IDGKVR-TDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLV |
I.GKV..T.ITYPAGFMDVISIDK.GENF.LIYDT....A.H.IT.EEAKYKL..VRKIFVGTKGIP.LV | |
Retrocopy | IEGKVP>TNITYPAGFMDVISIDKRGENFCLIYDTNSCPAAHCITSEEAKYKLYIVRKIFVGTKGIPRLV |
Parental | THDARTIRYPD-PLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGIITNRERHPGSFDVVH |
THDA.TI.Y.D.PL.KVNDTIQ..LE.GKITDFIKFDTGNLCMVTGG.NLGR.G.ITNRERHPGSF..VH | |
Retrocopy | THDAHTIHYTD>PLVKVNDTIQVELENGKITDFIKFDTGNLCMVTGGTNLGRTGMITNRERHPGSFGIVH |
Parental | VKDANGNSFATRLSNIFVIGK |
VKDANGNSFAT.LSNIFVI.K | |
Retrocopy | VKDANGNSFATQLSNIFVISK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |