Parental gene:

OS07G0631100

Aliases:None
Description:Transcription elongation factor 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q8LHP0]
Organism:Rice subsp. japonica (Oryza sativa japonica)
Coordinates:7:26169957..26172456(+)


>OS07G0631100
ATGGGAAAGAGGAAGTCAGCGGCTAAGCCACCACCTAAGAAGAGGATGGACAAGCTTGATACTGTATTTTCCTGCCCATT
CTGCAATCATGGCAGTAGTGTTGAATGCCGGATTGATATGAAGAACCTGATCGGCGAGGCTTCATGTAGGATCTGTCAGG
AAAACTTCAGCACCACTGTCAATGCACTGACTGAACCAATCGACATATATAGCGAATGGATTGATGAGTGCGAGCGTGTC
AACAATGTCGAAGACGACGACGGAGCATGA

Species Parental gene accession Homology type Retrogenes number
Oryza sativa indica BGIOSGA007878 ortholog_one2one 1 retrogene
retro_oind_10,
Aegilops tauschii F775_28085 ortholog_one2many 1 retrogene
retro_atau_24,
Hordeum vulgare MLOC_14907 ortholog_one2one 3 retrogenes
retro_hvul_85, retro_hvul_89, retro_hvul_97,
Oryza barthii OBART07G23140 ortholog_one2one 1 retrogene
retro_obar_9,
Oryza glumaepatula OGLUM07G23200 ortholog_one2one 1 retrogene
retro_oglu_13,
Oryza nivara ONIVA07G23000 ortholog_one2one 1 retrogene
retro_oniv_49,
Sorghum bicolor Sb10g003710 ortholog_one2one 1 retrogene
retro_sbic_12,
Setaria italica Si007595m.g ortholog_one2one 2 retrogenes
retro_sita_49, retro_sita_50,
Triticum aestivum Traes_1DL_84C83461E ortholog_one2many 2 retrogenes
retro_taes_162, retro_taes_71,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_osat_82 61.73 87.64
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Download FASTA sequences of all OS07G0631100 retrocopies