Parental gene:

Si007595m.g

Aliases:None
Description:None
Organism:Foxtail millet (Setaria italica)
Coordinates:4:5447931..5451558(-)


>Si007595m.g
ATGGGGAAGAGAAAGTCAGCTGCTAAGCCACCTCCTAAGAAGCGGATGGACAAGCTCGACACTGTCTTTTCCTGCCCATT
CTGCAATCATGGGAGCAGTGTTGAGTGCCGTATCGACATGAAGAATCTGATTGGCGAGGCTTCTTGTAGAATCTGTCAGG
AGAACTTCAGCACCACTGTTAATGATATAGTGAATGGATTGATGAGTGTGAGCGTGTCAACACTGTGGAAGGTGATGATG
ATGCGTGAGCTTTGCCCCCATGCGGATGAAACGGTTACTTGCAACTGTGTAATGTACTGGCATTCTCGAATGCCATAG

Species Parental gene accession Homology type Retrogenes number
Oryza sativa indica BGIOSGA007878 ortholog_one2one 1 retrogene
retro_oind_10,
Aegilops tauschii F775_28085 ortholog_one2many 1 retrogene
retro_atau_24,
Hordeum vulgare MLOC_14907 ortholog_one2one 3 retrogenes
retro_hvul_85, retro_hvul_89, retro_hvul_97,
Oryza barthii OBART07G23140 ortholog_one2one 1 retrogene
retro_obar_9,
Oryza glumaepatula OGLUM07G23200 ortholog_one2one 1 retrogene
retro_oglu_13,
Oryza nivara ONIVA07G23000 ortholog_one2one 1 retrogene
retro_oniv_49,
Oryza sativa japonica OS07G0631100 ortholog_one2one 1 retrogene
retro_osat_82,
Sorghum bicolor Sb10g003710 ortholog_one2one 1 retrogene
retro_sbic_12,
Triticum aestivum Traes_1DL_84C83461E ortholog_one2many 2 retrogenes
retro_taes_162, retro_taes_71,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sita_49 54.41 76.40
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2. retro_sita_50 53.57 62.92
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Download FASTA sequences of all Si007595m.g retrocopies