RetrogeneDB ID: | retro_chof_2358 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_68037:2614..2983(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | UBE2E3 | ||
Ensembl ID: | ENSCHOG00000007325 | ||
Aliases: | None | ||
Description: | ubiquitin-conjugating enzyme E2E 3 [Source:HGNC Symbol;Acc:12479] |
Percent Identity: | 74.8 % |
Parental protein coverage: | 87.23 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | SKTTAKLSTSAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPF |
S....KL.T...RIQKEL..ITLDPPP.C...P.GDNIYEWRSTILGP.GSVYE...FFLD.TF....PF | |
Retrocopy | SQHEQKLQTPVQRIQKELVDITLDPPPKCITHPRGDNIYEWRSTILGPSGSVYEDDIFFLDSTFTAEHPF |
Parental | KPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNP |
K.PKVTF.TRIYHCNINSQGVICLDILKDNWSPALTISKVLLSI..L...CNP | |
Retrocopy | KSPKVTFQTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSIYLLSYNCNP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |