RetrogeneDB ID: | retro_dord_102 | ||
Retrocopylocation | Organism: | Kangaroo rat (Dipodomys ordii) | |
Coordinates: | GeneScaffold_325:20117..20561(-) | ||
Located in intron of: | ENSDORG00000000842 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSDORG00000000974 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 93.24 % |
Parental protein coverage: | 81.77 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | APAPPKAEAKEKALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIK |
APAP..AEAKEKALKAKKAVLKGVHSHKKKKIRTSPTFR.PKTL.L.R.PKYPRKSAPRRNKLDHYAIIK | |
Retrocopy | APAPLNAEAKEKALKAKKAVLKGVHSHKKKKIRTSPTFRWPKTLWLQR*PKYPRKSAPRRNKLDHYAIIK |
Parental | FPLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALD |
FPLTTESAMK.IEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYD.LD | |
Retrocopy | FPLTTESAMKRIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDVLD |
Parental | VANKIGII |
VANKI..I | |
Retrocopy | VANKIRMI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |