Parental gene:

ENSLAFG00000013387

Aliases:None
Description:None
Organism:Elephant (Loxodonta africana)
Coordinates:scaffold_47:1722849..1725985(+)


>ENSLAFG00000013387
ATGGCGCCGAAAGCTAAGAAGGAAGCCCCTGCGCCTCCCAAAACTGAAGCCAAAGCAAAGGCGTTGAAGGCGAAGAAGGC
AGTGCTGAAAGGCGTCCATAGCCACAAAAAAAAGAAGATCCGCACTTCACCCACCTTCCGGCGGCCCAAGACACTGAGGC
TGCGAAGGCAGCCCAAATATCCTCGGAAGAGCGCCCCCAGGAGAAACAAGCTTGACCACTATGCCATCATTAAGTTCCCT
CTGACCACTGAGTCAGCCATGAAGAAGATAGAAGATAACAACACACTTGTGTTCATTGTGGATGTCAAGGCCAACAAGCA
CCAGATCAAACAGGCTGTGAAGAAGCTCTATGACATCGATGTGGCCAAGGTCAACACCTTGATTAGACCCGATGGAGAGA
AGAAGGCATATGTTCGACTGGCTCCTGACTATGATGCTTTGGATGTTGCCAACAAAATTGGGATCATATAA

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000005311 possible_ortholog 2 retrogenes
Ailuropoda melanoleuca ENSAMEG00000004684 possible_ortholog 31 retrogenes
Bos taurus ENSBTAG00000046394 possible_ortholog 6 retrogenes
Callithrix jacchus ENSCJAG00000013126 possible_ortholog 7 retrogenes
Cavia porcellus ENSCPOG00000001452 possible_ortholog 6 retrogenes
Dasypus novemcinctus ENSDNOG00000019487 possible_ortholog 65 retrogenes
Dipodomys ordii ENSDORG00000000974 possible_ortholog 10 retrogenes
Equus caballus ENSECAG00000008928 possible_ortholog 1 retrogene
Felis catus ENSFCAG00000004021 possible_ortholog 35 retrogenes
Homo sapiens ENSG00000198242 possible_ortholog 57 retrogenes
Gorilla gorilla ENSGGOG00000016736 possible_ortholog 26 retrogenes
Myotis lucifugus ENSMLUG00000012448 possible_ortholog 4 retrogenes
Monodelphis domestica ENSMODG00000019297 possible_ortholog 3 retrogenes
Mustela putorius furo ENSMPUG00000014179 possible_ortholog 12 retrogenes
Mus musculus ENSMUSG00000058546 possible_ortholog 8 retrogenes
Nomascus leucogenys ENSNLEG00000002872 possible_ortholog 60 retrogenes
Ochotona princeps ENSOPRG00000012620 possible_ortholog 49 retrogenes
Procavia capensis ENSPCAG00000017002 possible_ortholog 30 retrogenes
Pongo abelii ENSPPYG00000008108 possible_ortholog 49 retrogenes
Pteropus vampyrus ENSPVAG00000002922 possible_ortholog 32 retrogenes
Rattus norvegicus ENSRNOG00000023344 possible_ortholog 6 retrogenes
Sarcophilus harrisii ENSSHAG00000014549 possible_ortholog 13 retrogenes
Sus scrofa ENSSSCG00000017768 possible_ortholog 9 retrogenes
Sus scrofa ENSSSCG00000029802 possible_ortholog 4 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000011328 possible_ortholog 23 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_lafr_33 85.26 100.00
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2. retro_lafr_78 93.59 100.00
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3. retro_lafr_96 94.23 100.00
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4. retro_lafr_153 85.90 100.00
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5. retro_lafr_237 75.80 100.00
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6. retro_lafr_335 64.52 97.44
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7. retro_lafr_442 81.65 97.44
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8. retro_lafr_510 75.62 100.00
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9. retro_lafr_525 98.72 100.00
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10. retro_lafr_551 94.84 98.72
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11. retro_lafr_557 93.67 100.00
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12. retro_lafr_643 83.44 100.00
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13. retro_lafr_891 75.64 98.72
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14. retro_lafr_908 74.84 100.00
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15. retro_lafr_957 76.92 100.00
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16. retro_lafr_1176 57.62 91.67
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Download FASTA sequences of all ENSLAFG00000013387 retrocopies