RetrogeneDB ID: | retro_dord_310 | ||
Retrocopylocation | Organism: | Kangaroo rat (Dipodomys ordii) | |
Coordinates: | scaffold_1110:22053..22481(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSDORG00000000974 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 84.93 % |
Parental protein coverage: | 80.11 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | APAPPKAEAKEKALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIK |
APAPPKAEAKEKALKAKKAVLKGVHSHK.KKI.TSPTFR.PKTLRL.RQ.KYP.KSA.RRNKLDHYAII. | |
Retrocopy | APAPPKAEAKEKALKAKKAVLKGVHSHKTKKIPTSPTFRQPKTLRLQRQSKYP*KSALRRNKLDHYAIIS |
Parental | FPLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNT-LIRPDGEKKAYVRLAPDYDAL |
...TTESAMKKIED.NTL.FIVDVKANKHQ.KQAV.K..DIDVAK.NT.LIRPDGEK.AYV.LA.DYDAL | |
Retrocopy | W--TTESAMKKIEDSNTLLFIVDVKANKHQTKQAVNKHFDIDVAKINT<LIRPDGEKEAYV*LASDYDAL |
Parental | DVANKI |
DVANKI | |
Retrocopy | DVANKI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |