RetrogeneDB ID: | retro_lafr_71 | ||
Retrocopylocation | Organism: | Elephant (Loxodonta africana) | |
Coordinates: | scaffold_33:1198753..1199092(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSLAFG00000032714 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSLAFG00000032060 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 83.33 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | EDKINALIKAAGVNVEPFWPGLFAKALANVNVGSLICNVGAGGPAPAAGPAPAGGPAPSTAAAPAEEKKV |
EDK.NA.IKAAGVNVEPFWPGLFA.ALA.VNV.SLIC.V.AGGP.PAAG.APAGGPA.ST.AA.A.EKKV | |
Retrocopy | EDKLNAFIKAAGVNVEPFWPGLFANALAEVNVCSLICTVEAGGPTPAAGAAPAGGPATSTTAA-AAEKKV |
Parental | EAKKEESEESDDDMGFGLFD |
EA.K.ESEESDDDMGFGLFD | |
Retrocopy | EANK-ESEESDDDMGFGLFD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Latimeria chalumnae | ENSLACG00000012630 | 1 retrocopy | |
Loxodonta africana | ENSLAFG00000032060 | 3 retrocopies |
retro_lafr_379, retro_lafr_52, retro_lafr_71 ,
|
Macropus eugenii | ENSMEUG00000015277 | 6 retrocopies | |
Monodelphis domestica | ENSMODG00000009209 | 1 retrocopy | |
Oryctolagus cuniculus | ENSOCUG00000015087 | 8 retrocopies | |
Ochotona princeps | ENSOPRG00000001163 | 11 retrocopies | |
Sarcophilus harrisii | ENSSHAG00000014818 | 6 retrocopies | |
Tarsius syrichta | ENSTSYG00000013927 | 1 retrocopy |