RetrogeneDB ID: | retro_shar_550 | ||
Retrocopylocation | Organism: | Tasmanian devil (Sarcophilus harrisii) | |
Coordinates: | GL849896.1:395687..395883(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPLP1 | ||
Ensembl ID: | ENSSHAG00000014818 | ||
Aliases: | None | ||
Description: | ribosomal protein, large, P1 [Source:HGNC Symbol;Acc:10372] |
Percent Identity: | 77.27 % |
Parental protein coverage: | 57.02 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | CIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANI-DIGSLICNIGVGGAPPPAG |
C.YSALILH.DEV.V.EDKINALIKAAGVNVEPFWPGLFA.AL.N...IGSLIC..G.GG..P.AG | |
Retrocopy | CLYSALILHYDEVMVMEDKINALIKAAGVNVEPFWPGLFANALNNV>NIGSLICLVGTGGSAPAAG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |