RetrogeneDB ID: | retro_shar_614 | ||
Retrocopylocation | Organism: | Tasmanian devil (Sarcophilus harrisii) | |
Coordinates: | GL856779.1:324507..324749(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPLP1 | ||
Ensembl ID: | ENSSHAG00000014818 | ||
Aliases: | None | ||
Description: | ribosomal protein, large, P1 [Source:HGNC Symbol;Acc:10372] |
Percent Identity: | 56.1 % |
Parental protein coverage: | 71.05 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | SVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLF-AKALANIDIGSLICNIGVGGAPPP |
S.SE..CI.S.LILH..EV.V.E.KIN..IKAAGVNVEP.W..LF..K.L....I.S.ICN...G..P.. | |
Retrocopy | SISEFPCIFSVLILHNHEVMVMEVKINVFIKAAGVNVEPYWSELF<PKVLNKVNIESVICNLIGGPVPTA |
Parental | AGAAPTGGAAPA |
.G.AP...AAPA | |
Retrocopy | GGTAPATTAAPA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |