RetrogeneDB ID: | retro_shar_182 | ||
Retrocopylocation | Organism: | Tasmanian devil (Sarcophilus harrisii) | |
Coordinates: | GL834577.1:27255..27465(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPLP1 | ||
Ensembl ID: | ENSSHAG00000014818 | ||
Aliases: | None | ||
Description: | ribosomal protein, large, P1 [Source:HGNC Symbol;Acc:10372] |
Percent Identity: | 65.28 % |
Parental protein coverage: | 61.4 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | SVSELACIYSAL-ILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKAL-ANIDIGSLICNIGVGGAPP |
S.SEL.CIYS...ILHD.EVTV..DKI.ALIK.AGVNVE..WPGLF.KAL......GSLIC..GV.G..P | |
Retrocopy | SISELTCIYSCF>ILHDNEVTVKRDKITALIKVAGVNVESLWPGLFTKAL<EQVNTGSLICDVGVSGPAP |
Parental | PA |
.A | |
Retrocopy | VA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |