RetrogeneDB ID: | retro_meug_114 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | GeneScaffold_2943:9726..10074(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | BLOC1S2 | ||
Ensembl ID: | ENSMEUG00000003630 | ||
Aliases: | None | ||
Description: | biogenesis of lysosomal organelles complex-1, subunit 2 [Source:HGNC Symbol;Acc:20984] |
Percent Identity: | 68.97 % |
Parental protein coverage: | 87.88 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | LGRDDAVVETAEEATEPAEADITELCQDMFSKMATYLTGELTATSEDYKLLENMNKLTSLKYLEMKDIAV |
LG.DD.VVE.A.EA.EP....I..L.Q..FSKMA.YLT..L.AT.E.Y.LLE.MNKLT.LKYLEMKDI.V | |
Retrocopy | LGVDDVVVEMAKEALEPTNVNIKGLYQAVFSKMAMYLTSKLKATIENYELLEKMNKLTTLKYLEMKDITV |
Parental | NISRNLKDLNQKYAALQPYLDQITLIEEQVAALEQAAYKLDAYSKK |
NISRNLKDLN.K.A.L.P.L.QIT..EE..AALEQAAYKLD..SKK | |
Retrocopy | NISRNLKDLNKKCAVL*PSLNQITFTEERIAALEQAAYKLDGHSKK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |