RetrogeneDB ID: | retro_tbel_4051 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_59573:1066..1300(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | BLOC1S2 | ||
Ensembl ID: | ENSTBEG00000016889 | ||
Aliases: | None | ||
Description: | biogenesis of lysosomal organelles complex-1, subunit 2 [Source:HGNC Symbol;Acc:20984] |
Percent Identity: | 77.5 % |
Parental protein coverage: | 55.32 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | CRDMFSKMATYLTGELTATSEDYKLLENMNKLT-SLKYLEMKDIAINISRNXXXXXXXXAG-LQPYLDQI |
C.DMFSKMATYLTGELTATSED.KLLENMNKLT.SLKYLEMKDIAINISRN........A..LQPYLDQI | |
Retrocopy | C*DMFSKMATYLTGELTATSEDCKLLENMNKLT>SLKYLEMKDIAINISRNVKDLNQKYAD<LQPYLDQI |
Parental | NAIEEQVAAL |
....EQ.AAL | |
Retrocopy | SVLTEQGAAL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |