RetrogeneDB ID: | retro_meug_827 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold199281:103..451(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | BLOC1S2 | ||
Ensembl ID: | ENSMEUG00000003630 | ||
Aliases: | None | ||
Description: | biogenesis of lysosomal organelles complex-1, subunit 2 [Source:HGNC Symbol;Acc:20984] |
Percent Identity: | 83.62 % |
Parental protein coverage: | 87.88 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 0 |
Parental | GRDDAVVETAEEATEPAEADITELCQDMFSKMATYLTGELTATSEDYKLLENMNKLTSLKYLEMKDIAVN |
G..DAVVETAEE..EPAEAD.T.LCQDMFSKMA..L.G.LT.TSEDYKL..NMN.LTSLKYLEMKDIAVN | |
Retrocopy | GLEDAVVETAEEVMEPAEADVTWLCQDMFSKMAM*LPG*LTTTSEDYKLMKNMNTLTSLKYLEMKDIAVN |
Parental | ISRNLKDLNQKYAALQPYLDQITLIEEQVAALEQAAYKLDAYSKKL |
ISRNLKDLNQKYAALQPYLDQIT..E..VAALEQAAYK.DAYSKKL | |
Retrocopy | ISRNLKDLNQKYAALQPYLDQIT*TEKHVAALEQAAYKMDAYSKKL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |