RetrogeneDB ID: | retro_meug_1353 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold37726:7876..8203(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | BLOC1S2 | ||
Ensembl ID: | ENSMEUG00000003630 | ||
Aliases: | None | ||
Description: | biogenesis of lysosomal organelles complex-1, subunit 2 [Source:HGNC Symbol;Acc:20984] |
Percent Identity: | 76.36 % |
Parental protein coverage: | 83.33 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MAATAEGVPAAQREGLGRDDAVVETAEEATEPAEADITELCQDMFSKMATYLTGELTATSEDYKLLENMN |
M....EG..AA..EGLG...AV.ET.EEATE..EADIT.L.QDMFSKM.TYLTGELT.TSEDYKLLENMN | |
Retrocopy | MITATEGIVAAHWEGLG*YTAVLET-EEATELTEADITGLYQDMFSKMVTYLTGELTTTSEDYKLLENMN |
Parental | KLTSLKYLEMKDIAVNISRNLKDLNQKYAALQPYLDQITL |
K.T.LK.LEMKDI.VNISRNLK.LNQKYAA.QPYL.QITL | |
Retrocopy | KPTNLKHLEMKDITVNISRNLKGLNQKYAAIQPYLVQITL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |