RetrogeneDB ID: | retro_meug_2145 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold94630:8405..8747(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | BLOC1S2 | ||
Ensembl ID: | ENSMEUG00000003630 | ||
Aliases: | None | ||
Description: | biogenesis of lysosomal organelles complex-1, subunit 2 [Source:HGNC Symbol;Acc:20984] |
Percent Identity: | 78.26 % |
Parental protein coverage: | 87.12 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | GRDDAVVETAEEATEPAEADITELCQDMFSKMATYLTGELTATSEDYKLLENMNKLTSLKYLEMKDIAVN |
G..DAVVE..EEA.EP...DI..LC.DM.SKMATYLTGELT.T.EDYK.LENMNKLTSLKYLE.K.I... | |
Retrocopy | GLGDAVVEMVEEAMEPVGVDIKGLC*DMLSKMATYLTGELTVTNEDYKFLENMNKLTSLKYLERK-ILQ* |
Parental | ISRNLKDLNQKYAALQPYLDQITLIEEQVAALEQAAYKLDAYSKK |
.SRNLKDLNQKYAALQ.YLDQITL.EEQVA.LEQAAYKLD.YSKK | |
Retrocopy | TSRNLKDLNQKYAALQSYLDQITLTEEQVAVLEQAAYKLDTYSKK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |