RetrogeneDB ID: | retro_ogar_671 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873525.1:45988073..45988485(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | BLOC1S2 | ||
Ensembl ID: | ENSOGAG00000001395 | ||
Aliases: | None | ||
Description: | biogenesis of lysosomal organelles complex-1, subunit 2 [Source:HGNC Symbol;Acc:20984] |
Percent Identity: | 62.14 % |
Parental protein coverage: | 97.89 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | AAAAEGVPAPRREEPARDDAAVETAEEAKEPAEADINELCRDMFSKMATYLTGELTATSEDYKLLENMNK |
.A..EGVPA...E.P..DD...ETA.EAK.PAE.D..EL.RD..S.MA.YLTGEL.ATSED.K.LENMNK | |
Retrocopy | SAVVEGVPATQHEVPTGDDVVLETAREAKAPAEEDTTELGRDVLSQMAMYLTGELMATSEDDKVLENMNK |
Parental | LTSLKYLEMKDIAINISRNLKDLNQKYAGLQPYLDQINVIEEQVAALEQAAYKLDAYSKK-LEAKYKKLE |
LTS.KY.EM.DIA..I......L.QK....QPY..QI.V..E.VAA.EQAA.KL.A..KK.LEAKYKKLE | |
Retrocopy | LTSSKYPEMNDIAV-IAET*RTLKQKHGRSQPYQGQIKV-TEVVAAPEQAACKLNAHLKK>LEAKYKKLE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |