RetrogeneDB ID: | retro_meug_1687 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold53034:8403..8721(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | BLOC1S2 | ||
Ensembl ID: | ENSMEUG00000003630 | ||
Aliases: | None | ||
Description: | biogenesis of lysosomal organelles complex-1, subunit 2 [Source:HGNC Symbol;Acc:20984] |
Percent Identity: | 78.18 % |
Parental protein coverage: | 83.33 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | VETAEEATEPAEADITELCQDMFSKMATYLTGELTATSEDYKLLENMNKLTSLKYLEMKDIAVNISRNLK |
...A..ATEP.E.DIT..CQ.MFSKMATYL.GELTATSEDYK.LENMNKLTSL.YLEMKDIA.N.SRNLK | |
Retrocopy | LDNAMVATEPTEVDITWPCQHMFSKMATYLMGELTATSEDYKFLENMNKLTSLRYLEMKDIAINRSRNLK |
Parental | DLNQKYAALQPYLDQITLIEEQVAALEQAAYKLDAYSKKL |
....KYA...PYLDQITLIEEQVAALEQ.AYKLD.YSKKL | |
Retrocopy | ----KYATHEPYLDQITLIEEQVAALEQVAYKLDTYSKKL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |