RetrogeneDB ID: | retro_meug_1834 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold63912:2569..2905(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | BLOC1S2 | ||
Ensembl ID: | ENSMEUG00000003630 | ||
Aliases: | None | ||
Description: | biogenesis of lysosomal organelles complex-1, subunit 2 [Source:HGNC Symbol;Acc:20984] |
Percent Identity: | 71.93 % |
Parental protein coverage: | 86.36 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | GRDDAVVETAEEATEPAEADITELCQDMFSKMATYLTGELTATSEDYKLLENMNKLTSLKYLEMKDIAVN |
G..DAV.E...E.TEP.EADIT.LCQDM.SKMA..L.GE.TATSE..KLLENMN.LTSLKYLEMK.IAVN | |
Retrocopy | GLEDAVMEIP*EVTEPTEADITDLCQDMISKMAVCLMGEVTATSENHKLLENMNTLTSLKYLEMKAIAVN |
Parental | ISRNLKDLNQKYAALQPYLDQITLIEEQVAALEQAAYKLDAYSK |
ISRNLK..N..Y..L.PYLDQ.TL..EQVAALEQA.YK.D.Y.K | |
Retrocopy | ISRNLKKSNHNYVTLKPYLDQFTL-TEQVAALEQASYK-DVY*K |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |