RetrogeneDB ID: | retro_meug_243 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | GeneScaffold_7362:29445..29744(-) | ||
Located in intron of: | ENSMEUG00000001815 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | BLOC1S2 | ||
Ensembl ID: | ENSMEUG00000003630 | ||
Aliases: | None | ||
Description: | biogenesis of lysosomal organelles complex-1, subunit 2 [Source:HGNC Symbol;Acc:20984] |
Percent Identity: | 60.78 % |
Parental protein coverage: | 76.52 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | DDAVVETAEEATEPAEADITELCQDMFSKM-ATYLTGELTATSEDYKLLENMNKLTSLKYLEMKDIAVNI |
DD.VVE...EATE..E.DIT.LCQD.FSK...TYL.GELT.TSE.YK.L....K.....YL.MKDI.V.I | |
Retrocopy | DDTVVEMTNEATENTEVDITRLCQDVFSKV<STYLRGELTVTSENYKVLRKKMKKLA*-YLGMKDITVSI |
Parental | SRNLKDLNQKYAALQPYLDQITLIEEQVAALE |
.RNLKDLNQ..AA..P.LDQIT....QV.AL. | |
Retrocopy | NRNLKDLNQTFAASVPHLDQITFTKGQVSALK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |