RetrogeneDB ID: | retro_mluc_595 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429769:7537588..7538001(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMLUG00000029658 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RHOQ | ||
Ensembl ID: | ENSMLUG00000001567 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 94.24 % |
Parental protein coverage: | 82.14 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | EDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLND |
EDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEW.PEL.EYAPNVPFLLIGTQIDLRDDPKTLARLND | |
Retrocopy | EDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWIPELTEYAPNVPFLLIGTQIDLRDDPKTLARLND |
Parental | MKEKPICVEQGQKLAKEIGACCYVECSALTQKGLKTV-FDEAIIAILTPKKHTVKKRIGSRCINCCLIT |
MKEKPICVEQGQKLAKEIGACCYVECSALTQKGLKTV.F.EAIIAILTPKKHT....IGSRCINCCLIT | |
Retrocopy | MKEKPICVEQGQKLAKEIGACCYVECSALTQKGLKTV<FNEAIIAILTPKKHTXXXXIGSRCINCCLIT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000006082 | 1 retrocopy | |
Choloepus hoffmanni | ENSCHOG00000000549 | 3 retrocopies | |
Erinaceus europaeus | ENSEEUG00000015226 | 1 retrocopy | |
Echinops telfairi | ENSETEG00000019234 | 3 retrocopies | |
Felis catus | ENSFCAG00000015608 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000001567 | 1 retrocopy |
retro_mluc_595 ,
|
Myotis lucifugus | ENSMLUG00000009701 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000012668 | 2 retrocopies | |
Myotis lucifugus | ENSMLUG00000013365 | 4 retrocopies | |
Pteropus vampyrus | ENSPVAG00000013691 | 1 retrocopy | |
Rattus norvegicus | ENSRNOG00000015415 | 1 retrocopy | |
Sus scrofa | ENSSSCG00000008439 | 1 retrocopy | |
Tursiops truncatus | ENSTTRG00000011892 | 1 retrocopy |