RetrogeneDB ID: | retro_mluc_905 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429781:14568956..14569382(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMLUG00000025296 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | CDC42 | ||
Ensembl ID: | ENSMLUG00000013365 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 90.85 % |
Parental protein coverage: | 74.35 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | EPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQID |
E...LGLFDTAGQED.DRLRPLSYPQTDVFLVCFSVVSPSSF.NVKEKWVP.ITHHCPKT.FLLVGTQ.D | |
Retrocopy | ESHILGLFDTAGQEDCDRLRPLSYPQTDVFLVCFSVVSPSSFGNVKEKWVPGITHHCPKTLFLLVGTQTD |
Parental | LRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPEPKKSRRC |
LRDDPS.IEKLAKNKQKPITPETAEKLA.DLKA.KYV.CSALTQKGLKNVFDEA.LAALEPPEPKKSRRC | |
Retrocopy | LRDDPSPIEKLAKNKQKPITPETAEKLACDLKAAKYVACSALTQKGLKNVFDEAVLAALEPPEPKKSRRC |
Parental | VL |
VL | |
Retrocopy | VL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Canis familiaris | ENSCAFG00000014707 | 5 retrocopies | |
Choloepus hoffmanni | ENSCHOG00000005306 | 10 retrocopies | |
Callithrix jacchus | ENSCJAG00000005912 | 6 retrocopies | |
Cavia porcellus | ENSCPOG00000006543 | 4 retrocopies | |
Equus caballus | ENSECAG00000019180 | 1 retrocopy | |
Felis catus | ENSFCAG00000004853 | 4 retrocopies | |
Homo sapiens | ENSG00000070831 | 6 retrocopies | |
Myotis lucifugus | ENSMLUG00000001567 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000009701 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000012668 | 2 retrocopies | |
Myotis lucifugus | ENSMLUG00000013365 | 4 retrocopies | |
Monodelphis domestica | ENSMODG00000016078 | 3 retrocopies | |
Mustela putorius furo | ENSMPUG00000015999 | 2 retrocopies | |
Oryctolagus cuniculus | ENSOCUG00000009986 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000014261 | 1 retrocopy | |
Sorex araneus | ENSSARG00000005184 | 3 retrocopies | |
Sus scrofa | ENSSSCG00000003520 | 1 retrocopy |