RetrogeneDB ID: | retro_mputfur_413 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL896908.1:135768..136121(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL27 | ||
Ensembl ID: | ENSMPUG00000009913 | ||
Aliases: | None | ||
Description: | ribosomal protein L27 [Source:HGNC Symbol;Acc:10328] |
Percent Identity: | 56.2 % |
Parental protein coverage: | 87.5 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | YSGRKAVIVKNIDD-GTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIK-SFVKVYNYNHLMPTRY |
Y...K.V..K..DD..TS..PYSHAL.AGID.YP.KV..AMG.KK..K......SFVK..N.NH.M.T.Y | |
Retrocopy | YCQGKVVLEKSTDD>ATSNQPYSHALGAGIDHYPNKVIVAMG-KKRSKINDLI>SFVKICNHNHFMTTSY |
Parental | SVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF |
...I.LDK.V..KDVFR.PALK.KA.R.A.V.F...YKT.K.K..FQKL.F | |
Retrocopy | PAGILLDKPVGSKDVFRNPALKYKA*RRAEVEF-NIYKTSKSKRLFQKLQF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |