RetrogeneDB ID: | retro_nleu_848 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397275.1:217991..218448(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PFN1 | ||
Ensembl ID: | ENSNLEG00000017446 | ||
Aliases: | None | ||
Description: | Profilin [Source:UniProtKB/TrEMBL;Acc:G1S6M7] |
Percent Identity: | 71.61 % |
Parental protein coverage: | 83.61 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | PSSSAKSSPRSSAMAGW-NAYIDNLMADGTCQDAAIVGYKDSPSVWAAVPGKTFVNITPAEVGVLVGKDR |
PSSS...SP.SSA.A.W..A.I..L.AD.TC.D.AI.G.K.SPS.WA..PGKTF.NITPA.VGVLVGKD. | |
Retrocopy | PSSSDQRSPHSSATARW<DASIYSLVADRTC*DVAIMGNKESPSNWAIGPGKTFINITPAAVGVLVGKDW |
Parental | SSF-YVNGLTLGGQKCSVIRDSLLQDGEFSMDLRTKSTGGAPTFNVTVTKTDKTLVLLMGKEGVHGGLIN |
SSF...NGLTLGG.K..V..DSLLQDGE...DL.TKS.GGAPTFNVTVT.T.KTL.LLMGKEGVHG..IN | |
Retrocopy | SSF<FLNGLTLGGKKYTVVSDSLLQDGELTVDLQTKSIGGAPTFNVTVTVTAKTLGLLMGKEGVHGSFIN |
Parental | KKCYEMASHLRRSQY |
K.CYEMASHL.RSQY | |
Retrocopy | KQCYEMASHLQRSQY |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |