RetrogeneDB ID: | retro_ogar_3232 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873749.1:1707505..1708098(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSOGAG00000002711 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 86.43 % |
Parental protein coverage: | 99.49 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | GKQKKTRKYATMKRMLSLRDQRLKEKDRLKPKKKEKKDPSTLKEREVP-QHPSCLFFQYNTQLGPPYHIL |
GKQKKTRKYATMKRMLSLRDQRL...............PSTLKEREVP.QHPSCLFFQYNTQLGPPYHIL | |
Retrocopy | GKQKKTRKYATMKRMLSLRDQRLXXXXXXXXXXXXXXXPSTLKEREVP>QHPSCLFFQYNTQLGPPYHIL |
Parental | VDTNFINFSIKAKLDLVQSMMDCLYAKCI-PCITDCVMAEIEKLGQKYRVALRIAKDPRFERLPCTHKGT |
VDTNFINFSIKAKL.LVQSM.DCLYAKCI.PCITDCVMAEIEKLGQKY.VALRIAKDPRFE.LPCTHKGT | |
Retrocopy | VDTNFINFSIKAKLNLVQSMVDCLYAKCI>PCITDCVMAEIEKLGQKYQVALRIAKDPRFEQLPCTHKGT |
Parental | YADDCLVQRVTQHKCYIVATVDRDLKRRIRKIPGVPIMYISNHRYNIERMPDDYGAPRF |
..D.CLVQRVTQ.KCYIVATVDRDLK.RIRKIPGVPIMYISNHRYNIERMP.DYGAPRF | |
Retrocopy | CIDNCLVQRVTQNKCYIVATVDRDLK*RIRKIPGVPIMYISNHRYNIERMPGDYGAPRF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |