RetrogeneDB ID: | retro_pcap_25 | ||
Retrocopylocation | Organism: | Hyrax (Procavia capensis) | |
Coordinates: | GeneScaffold_1040:136016..136234(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | DNAJC19 | ||
Ensembl ID: | ENSPCAG00000014950 | ||
Aliases: | None | ||
Description: | DnaJ (Hsp40) homolog, subfamily C, member 19 [Source:HGNC Symbol;Acc:30528] |
Percent Identity: | 82.43 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | AFSGGYYRGGFEPRMTKREAALILGVSPTANKGKIRDAHRRIMLLNHPDKGGSPYLAAKINEAKDF-LEG |
AF.GGYYRGG.EP.MTKRE.ALILG.S.TANKGKIRDAHRRI.LLNHPD.G.S.YLA..INEAKDF.LEG | |
Retrocopy | AFTGGYYRGGSEPQMTKRETALILGISLTANKGKIRDAHRRITLLNHPDNGDSLYLAVNINEAKDF<LEG |
Parental | QAKK |
QAKK | |
Retrocopy | QAKK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |