Parental gene:

ENSLAFG00000001910

Aliases:None
Description:None
Organism:Elephant (Loxodonta africana)
Coordinates:scaffold_25:1522218..1545450(-)


>ENSLAFG00000001910
GCCGGCACTGTTGTTGCAGTCGGACTGACCATCGCTGCCGCAGGATTTGCAGGCCGTTATGTTTTGCGAGCCATGAAGCA
TGTGGAGCCTCAAGTAAAACAAGTCTTTAAAAGTCTACCAAAATCTGCCTTCAGTGGTGGCTATTACAGAGGTGGATTTG
AACCCAAAATGACAAAACGGGAAGCAGCATTGATACTGGGTGTAAGCCCTACTGCCAATAAAGGAAAAATCAGAGATGCT
CATCGACGAATTATGCTCTTAAATCACCCAGACAAGGGCCCTCTGGTGGAAGAAGGTCTGAAACCCATACCAATCTGTCG
TAGCTGTTCATCAATCTGTAGGCGTTCCATTCTTAGCTGTTCTACTTCCTATAATCAAAACAAAAAT

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000012255 possible_ortholog 6 retrogenes
Bos taurus ENSBTAG00000023513 possible_ortholog 1 retrogene
Canis familiaris ENSCAFG00000032714 possible_ortholog 8 retrogenes
Callithrix jacchus ENSCJAG00000012795 ortholog_one2many 10 retrogenes
Cavia porcellus ENSCPOG00000021198 ortholog_one2one 1 retrogene
Dasypus novemcinctus ENSDNOG00000019067 possible_ortholog 1 retrogene
Dipodomys ordii ENSDORG00000005862 possible_ortholog 7 retrogenes
Erinaceus europaeus ENSEEUG00000006955 possible_ortholog 9 retrogenes
Echinops telfairi ENSETEG00000006897 possible_ortholog 7 retrogenes
Ficedula albicollis ENSFALG00000008296 ortholog_one2many 1 retrogene
Felis catus ENSFCAG00000010591 possible_ortholog 7 retrogenes
Homo sapiens ENSG00000205981 possible_ortholog 8 retrogenes
Gallus gallus ENSGALG00000008852 ortholog_one2many 1 retrogene
Gorilla gorilla ENSGGOG00000009120 possible_ortholog 7 retrogenes
Loxodonta africana ENSLAFG00000004343 within_species_paralog 2 retrogenes
Microcebus murinus ENSMICG00000010381 possible_ortholog 4 retrogenes
Myotis lucifugus ENSMLUG00000006865 possible_ortholog 1 retrogene
Macaca mulatta ENSMMUG00000012104 possible_ortholog 3 retrogenes
Mustela putorius furo ENSMPUG00000002336 possible_ortholog 7 retrogenes
Mus musculus ENSMUSG00000027679 ortholog_one2one 3 retrogenes
Oryctolagus cuniculus ENSOCUG00000014043 possible_ortholog 5 retrogenes
Otolemur garnettii ENSOGAG00000008754 possible_ortholog 11 retrogenes
Ochotona princeps ENSOPRG00000009256 ortholog_one2one 5 retrogenes
Procavia capensis ENSPCAG00000014950 ortholog_one2one 2 retrogenes
Pongo abelii ENSPPYG00000014328 possible_ortholog 2 retrogenes
Pan troglodytes ENSPTRG00000030046 possible_ortholog 7 retrogenes
Rattus norvegicus ENSRNOG00000049819 ortholog_one2one 1 retrogene
Sus scrofa ENSSSCG00000011770 possible_ortholog 2 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000011508 ortholog_one2one 1 retrogene
Tupaia belangeri ENSTBEG00000015089 possible_ortholog 27 retrogenes
Tarsius syrichta ENSTSYG00000001611 possible_ortholog 3 retrogenes
Tursiops truncatus ENSTTRG00000014700 possible_ortholog 6 retrogenes
Vicugna pacos ENSVPAG00000003387 possible_ortholog 1 retrogene

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_lafr_48 93.91 99.14
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2. retro_lafr_515 75.34 62.93
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3. retro_lafr_611 66.32 81.03
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4. retro_lafr_881 72.55 87.07
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5. retro_lafr_929 73.47 82.76
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Download FASTA sequences of all ENSLAFG00000001910 retrocopies