Parental gene:

DNAJC19, ENSCPOG00000021198

Aliases:None
Description:DnaJ (Hsp40) homolog, subfamily C, member 19 [Source:HGNC Symbol;Acc:30528]
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_47:11851477..11875263(-)


>ENSCPOG00000021198
CAGGCCAGTACAGTGATAGCAGTTGGACTGACCATTGCTGCTGCAGGATTTGCAGGCCGTTATGTTTTACAAGCCATGAA
GCATATGGAACCTCAAGTAAAACAAGTTTTTCAGAGTCTACCAAAATCAGCCTTCAGTGGTGGCTATTATAGAGGTGGAT
TTGAACCCAAAATGACAAAACGGGAAGCAGCATTAATACTAGGTGTCAGCCCTACTGCCAATAAAGGAAAAATAAGAGAT
GCTCATCGGCGAATTATGCTCTTAAATCACCCAGACAAAGGCCCTCTGGTGGAAGAAGGTCTAAAACCCATACCAATCTG
TCGTAGCTGCTCATCGATCTGTAGACGTTCCATTCTTAGCTGCTCCACTTCCTATAAACCAAACAAA

Library Parental gene expression (RPM)
SRP017611_brain 6 .56 RPM
SRP017611_kidney 11 .72 RPM
SRP017611_liver 10 .88 RPM
SRP040447_lung 6 .08 RPM
SRP040447_skeletal_muscle 17 .75 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000012255 possible_ortholog 6 retrogenes
retro_amel_1087, retro_amel_155, retro_amel_252, retro_amel_283, retro_amel_744, retro_amel_994,
Bos taurus ENSBTAG00000023513 possible_ortholog 1 retrogene
retro_btau_127,
Callithrix jacchus ENSCJAG00000012795 ortholog_one2many 10 retrogenes
retro_cjac_1008, retro_cjac_1192, retro_cjac_1364, retro_cjac_1430, retro_cjac_1550, retro_cjac_252, retro_cjac_2609, retro_cjac_2890, retro_cjac_3060, retro_cjac_914,
Cavia porcellus ENSCPOG00000003485 within_species_paralog 1 retrogene
retro_cpor_327,
Dasypus novemcinctus ENSDNOG00000019067 possible_ortholog 1 retrogene
retro_dnov_49,
Erinaceus europaeus ENSEEUG00000006955 possible_ortholog 9 retrogenes
retro_eeur_221, retro_eeur_230, retro_eeur_309, retro_eeur_455, retro_eeur_48, retro_eeur_511, retro_eeur_596, retro_eeur_74, retro_eeur_94,
Echinops telfairi ENSETEG00000006897 possible_ortholog 7 retrogenes
retro_etel_1071, retro_etel_1222, retro_etel_1559, retro_etel_275, retro_etel_384, retro_etel_81, retro_etel_821,
Ficedula albicollis ENSFALG00000008296 ortholog_one2many 1 retrogene
retro_falb_28,
Felis catus ENSFCAG00000010591 possible_ortholog 7 retrogenes
retro_fcat_1250, retro_fcat_1481, retro_fcat_1603, retro_fcat_1837, retro_fcat_475, retro_fcat_511, retro_fcat_982,
Gallus gallus ENSGALG00000008852 ortholog_one2many 1 retrogene
retro_ggal_17,
Gorilla gorilla ENSGGOG00000009120 possible_ortholog 7 retrogenes
retro_ggor_1037, retro_ggor_1483, retro_ggor_1484, retro_ggor_1783, retro_ggor_2365, retro_ggor_491, retro_ggor_517,
Loxodonta africana ENSLAFG00000001910 ortholog_one2one 5 retrogenes
retro_lafr_48, retro_lafr_515, retro_lafr_611, retro_lafr_881, retro_lafr_929,
Microcebus murinus ENSMICG00000010381 possible_ortholog 4 retrogenes
retro_mmur_1160, retro_mmur_225, retro_mmur_320, retro_mmur_728,
Myotis lucifugus ENSMLUG00000006865 possible_ortholog 1 retrogene
retro_mluc_84,
Macaca mulatta ENSMMUG00000012104 possible_ortholog 3 retrogenes
retro_mmul_2142, retro_mmul_2454, retro_mmul_946,
Mustela putorius furo ENSMPUG00000002336 possible_ortholog 7 retrogenes
retro_mputfur_1099, retro_mputfur_1652, retro_mputfur_287, retro_mputfur_662, retro_mputfur_841, retro_mputfur_848, retro_mputfur_984,
Mus musculus ENSMUSG00000027679 ortholog_one2one 3 retrogenes
retro_mmus_1446, retro_mmus_3071, retro_mmus_3554,
Otolemur garnettii ENSOGAG00000008754 possible_ortholog 11 retrogenes
retro_ogar_1214, retro_ogar_1334, retro_ogar_138, retro_ogar_1625, retro_ogar_1811, retro_ogar_2012, retro_ogar_2048, retro_ogar_2881, retro_ogar_301, retro_ogar_442, retro_ogar_718,
Ochotona princeps ENSOPRG00000009256 ortholog_one2one 5 retrogenes
retro_opri_1127, retro_opri_122, retro_opri_440, retro_opri_529, retro_opri_844,
Procavia capensis ENSPCAG00000014950 ortholog_one2one 2 retrogenes
retro_pcap_195, retro_pcap_25,
Pongo abelii ENSPPYG00000014328 possible_ortholog 2 retrogenes
retro_pabe_2126, retro_pabe_44,
Rattus norvegicus ENSRNOG00000049819 ortholog_one2one 1 retrogene
retro_rnor_2913,
Sus scrofa ENSSSCG00000011770 possible_ortholog 2 retrogenes
retro_sscr_651, retro_sscr_891,
Ictidomys tridecemlineatus ENSSTOG00000011508 ortholog_one2one 1 retrogene
retro_itri_552,
Tupaia belangeri ENSTBEG00000015089 possible_ortholog 27 retrogenes
retro_tbel_1126, retro_tbel_1166, retro_tbel_1167, retro_tbel_1296, retro_tbel_1301, retro_tbel_1491, retro_tbel_1693, retro_tbel_1780, retro_tbel_2117, retro_tbel_2136, retro_tbel_2267, retro_tbel_2459, retro_tbel_266, retro_tbel_2830, retro_tbel_3233, retro_tbel_3303, retro_tbel_3556, retro_tbel_3716, retro_tbel_3814, retro_tbel_384, retro_tbel_3849, retro_tbel_3963, retro_tbel_4043, retro_tbel_42, retro_tbel_633, retro_tbel_833, retro_tbel_889,
Tarsius syrichta ENSTSYG00000001611 possible_ortholog 3 retrogenes
retro_tsyr_112, retro_tsyr_174, retro_tsyr_312,
Tursiops truncatus ENSTTRG00000014700 possible_ortholog 6 retrogenes
retro_ttru_1023, retro_ttru_1630, retro_ttru_1830, retro_ttru_662, retro_ttru_704, retro_ttru_962,
Vicugna pacos ENSVPAG00000003387 possible_ortholog 1 retrogene
retro_vpac_533,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_126 87.10 72.09
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Download FASTA sequences of all ENSCPOG00000021198 retrocopies