RetrogeneDB ID: | retro_pvam_1378 | ||
Retrocopylocation | Organism: | Megabat (Pteropus vampyrus) | |
Coordinates: | scaffold_7448:38358..38726(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | LAMTOR3 | ||
Ensembl ID: | ENSPVAG00000017674 | ||
Aliases: | None | ||
Description: | late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 [Source:HGNC Symbol;Acc:15606] |
Percent Identity: | 69.84 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | MADDLKRFLYKKLPSV-EGLHAIVVSDRDGVPVIKVANDNAPEHALRPGFLSTFALATDQGSKLGLSKNK |
MADD..R.L.KK.P.V..G........R..VPVIKVA.DNAPEH..RPGFL.TF..A.DQGSK..LSKNK | |
Retrocopy | MADDVNRCL*KKFPGV>QGSMLVLCQSR--VPVIKVADDNAPEHTSRPGFLYTFPCAIDQGSKPRLSKNK |
Parental | SIICYYNTYQVVQFNRLPLVVSFIASS-SANTGLIVSLEKELAPLFEELRQVVEVS |
SIICYYN.Y.VV.FN.LPLVVSF.A.S..ANTGLIV.LEKELAPLFEE..QVVEVS | |
Retrocopy | SIICYYNIYEVVRFNLLPLVVSFRARS>NANTGLIVNLEKELAPLFEESSQVVEVS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |