RetrogeneDB ID: | retro_tbel_1144 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_3935:92691..93192(+) | ||
Located in intron of: | ENSTBEG00000007434 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FTL | ||
Ensembl ID: | ENSTBEG00000005311 | ||
Aliases: | None | ||
Description: | ferritin, light polypeptide [Source:HGNC Symbol;Acc:3999] |
Percent Identity: | 77.91 % |
Parental protein coverage: | 97.04 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 2 |
Parental | SSQIRQNYSTEVEAAVNRMVNLHLR-ASYTYLSLGFYFDRDDVALEGVGHFFRELAEEKREGAERLLKMQ |
SS.I.QNYSTEVE.AVNR.VNL.LR.AS.TYLSLGFYFD.DDVALEG.GHFFRELA.EKR.GA..LLKMQ | |
Retrocopy | SS*ICQNYSTEVEVAVNRKVNLYLR<ASFTYLSLGFYFDHDDVALEGMGHFFRELAKEKRKGA*HLLKMQ |
Parental | NQRGGRALFQDVQKPSQDEWGKTLDAMEAALALEKTLNQALLDLHALGSTHT-DPHLCDFLETHFLDEEV |
NQ.GG.ALFQ..QKPSQDEWGKTLDAMEAALALEKTLNQAL.DLH.L...HT..PH.CDFLETHFLDEEV | |
Retrocopy | NQWGGHALFQAMQKPSQDEWGKTLDAMEAALALEKTLNQAL*DLHPL---HT>NPHFCDFLETHFLDEEV |
Parental | KVI-EMGDHLT-ILRLG----GQAGEYLFERL |
K.I..MGDHLT...RLG....G...EYLFERL | |
Retrocopy | KLIKKMGDHLTNLCRLGVGSPGGLSEYLFERL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |