RetrogeneDB ID: | retro_tbel_1889 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_5947:675634..676074(+) | ||
Located in intron of: | ENSTBEG00000001568 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FTL | ||
Ensembl ID: | ENSTBEG00000005311 | ||
Aliases: | None | ||
Description: | ferritin, light polypeptide [Source:HGNC Symbol;Acc:3999] |
Percent Identity: | 67.79 % |
Parental protein coverage: | 86.98 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MSSQIRQNYSTEVEAAVNRMVNLHLRASYTYLSLGFYFDRDDVALEGVGHFFRELAEEKREGAERLLKMQ |
M.SQI.QNYS..VEAAVN.MVN.H..ASYTY.SLGF.F...D..LE.VGHF..ELA..K..G.E.LLK.Q | |
Retrocopy | MTSQIHQNYSPKVEAAVNHMVNQHPLASYTYVSLGFCFSSEDMVLECVGHFY-ELAKKKHKGTEHLLKTQ |
Parental | NQRGGRALFQDVQKPSQDEWGKTLDAMEAALALEKTLNQALLDLHALGSTHTDPHLCDFLETHF-LDEEV |
N..GG..LFQDVQKPSQDEW.KTL.A.E.ALAL...LNQALL.LHA.GS.H.D.H.CDFLE.HF.LDEEV | |
Retrocopy | NHHGGHTLFQDVQKPSQDEWSKTLEAIESALALK*SLNQALLNLHAVGSAHSDRHVCDFLEAHF<LDEEV |
Parental | KVI-EMGDH |
K.I..MG.H | |
Retrocopy | KLIKKMGKH |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |