Parental gene:

FTL, ENSOCUG00000000014

Aliases:None
Description:ferritin, light polypeptide (FTL), mRNA [Source:RefSeq mRNA;Acc:NM_001101688]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:GL019028:86632..87941(-)


>ENSOCUG00000000014
CCCGAGGTGGAGGCTGCCGTCAACCACCTGGTCAATCTGCATCTGCGGGCCTCCTACACCTACCTCTCTCTGGGCTTCTA
TTTCGACCGCGACGATGTGGCTCTGGAGGGCGTGAGCCACTTCTTCCGCGAGTTGGCGGAGGAGAAGCGCGAGGCCGCCG
AGCGGCTCCTGAAGATGCAAAACCAGCGCGGAGGCCGCGCCCTCTTCCAGGACGTGCAGAAGCCGTCCCAGGATGAGTGG
GGCAAGACCCTCAACGCCATGGAAGCCGCCTTGGCCCTGGAGAAGAACCTGAACCAGGCGCTCCTGGACCTTCATGCCTT
GGGATCCGCCCACACGGACCCTCACCTCTGTGACTTCCTGGAGAACCACTTCCTGGACGAGGAGGTGAAGCTCCTGAAGA
AGATGGGCGACCACCTGACCAACATCCGCCGCCTGAGCGGCCCCCAGGCCTCGCTGGGCGAGTATCTCTTCGAGAGGCTC
ACGCTCAAGCACGACTAG

Library Parental gene expression (RPM)
SRP017611_liver 2804 .91 RPM
SRP017611_kidney 2315 .29 RPM
SRP017611_brain 326 .16 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000014582 possible_ortholog 27 retrogenes
Bos taurus ENSBTAG00000013343 possible_ortholog 33 retrogenes
Canis familiaris ENSCAFG00000003861 possible_ortholog 1 retrogene
Callithrix jacchus ENSCJAG00000000250 possible_ortholog 13 retrogenes
Cavia porcellus ENSCPOG00000020558 possible_ortholog 1 retrogene
Dasypus novemcinctus ENSDNOG00000002455 possible_ortholog 9 retrogenes
Dasypus novemcinctus ENSDNOG00000004126 possible_ortholog 5 retrogenes
Dasypus novemcinctus ENSDNOG00000005577 possible_ortholog 36 retrogenes
Dasypus novemcinctus ENSDNOG00000007848 possible_ortholog 2 retrogenes
Dasypus novemcinctus ENSDNOG00000016683 possible_ortholog 8 retrogenes
Dipodomys ordii ENSDORG00000015550 possible_ortholog 5 retrogenes
Felis catus ENSFCAG00000003348 possible_ortholog 37 retrogenes
Homo sapiens ENSG00000087086 possible_ortholog 11 retrogenes
Gorilla gorilla ENSGGOG00000011999 possible_ortholog 9 retrogenes
Loxodonta africana ENSLAFG00000031248 possible_ortholog 11 retrogenes
Microcebus murinus ENSMICG00000001861 possible_ortholog 7 retrogenes
Macaca mulatta ENSMMUG00000003909 possible_ortholog 9 retrogenes
Mustela putorius furo ENSMPUG00000003304 possible_ortholog 29 retrogenes
Mus musculus ENSMUSG00000050708 ortholog_many2many 1 retrogene
Nomascus leucogenys ENSNLEG00000004716 possible_ortholog 10 retrogenes
Oryctolagus cuniculus ENSOCUG00000014108 other_paralog 4 retrogenes
Ochotona princeps ENSOPRG00000002492 possible_ortholog 10 retrogenes
Procavia capensis ENSPCAG00000013227 possible_ortholog 6 retrogenes
Pongo abelii ENSPPYG00000010223 possible_ortholog 11 retrogenes
Pan troglodytes ENSPTRG00000011268 possible_ortholog 11 retrogenes
Pteropus vampyrus ENSPVAG00000009570 possible_ortholog 25 retrogenes
Rattus norvegicus ENSRNOG00000020843 ortholog_many2many 7 retrogenes
Sorex araneus ENSSARG00000011741 possible_ortholog 12 retrogenes
Sus scrofa ENSSSCG00000003153 possible_ortholog 33 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000020639 possible_ortholog 7 retrogenes
Tupaia belangeri ENSTBEG00000005311 possible_ortholog 13 retrogenes
Tarsius syrichta ENSTSYG00000013988 possible_ortholog 56 retrogenes
Tursiops truncatus ENSTTRG00000001252 possible_ortholog 66 retrogenes
Vicugna pacos ENSVPAG00000005509 possible_ortholog 3 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_223 78.12 96.97
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2. retro_ocun_357 69.64 99.39
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3. retro_ocun_530 59.79 57.58
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4. retro_ocun_982 60.87 68.48
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5. retro_ocun_1090 64.89 76.36
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6. retro_ocun_1627 61.07 89.70
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Download FASTA sequences of all ENSOCUG00000000014 retrocopies