RetrogeneDB ID: | retro_tsyr_2012 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_79136:4460..4776(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | CALM2 | ||
Ensembl ID: | ENSTSYG00000012564 | ||
Aliases: | None | ||
Description: | calmodulin 2 (phosphorylase kinase, delta) [Source:HGNC Symbol;Acc:1445] |
Percent Identity: | 81.48 % |
Parental protein coverage: | 70.95 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQ-NPTEAELQDMINEVDADGNGTIDFPEFL |
ADQLTEEQIAEFK..FSLFDKDGDGTITTKEL.TVMRSLGQ.NPTEA..QDMI..VDADGNGT..FPE.L | |
Retrocopy | ADQLTEEQIAEFKDGFSLFDKDGDGTITTKELETVMRSLGQ>NPTEAAMQDMIKQVDADGNGTTAFPELL |
Parental | TMMARKMKDTDSEEE-IREAFRVFDKDG-NGYISAAEL |
TMMARKMKDTDSEEE.I.EAF.VFD..G..G.IS.AEL | |
Retrocopy | TMMARKMKDTDSEEE<IPEAFCVFDEHG>TGCISTAEL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |